Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AL592429.1-201ENST00000403909 1473 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC004656.1-201ENST00000568479 4951 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 Z95114.1-201ENST00000624264 14574 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AL121768.1-201ENST00000613917 2544 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 RNU5E-4P-201ENST00000364931 120 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 RNA5SP211-201ENST00000365516 117 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 RN7SKP33-201ENST00000410942 340 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 RPS4XP5-201ENST00000419038 768 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC010975.2-201ENST00000427781 588 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AL162739.1-201ENST00000450606 307 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AL445665.1-202ENST00000452436 324 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 SDC4P-201ENST00000453285 601 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 BX248409.1-201ENST00000455497 255 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 PFN1P6-201ENST00000476786 399 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 RPL7P51-201ENST00000490532 749 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC138853.1-201ENST00000503549 823 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC109471.1-201ENST00000511631 612 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 RNU6-1178P-201ENST00000516674 107 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 SNORA70.20-201ENST00000516848 126 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 IGLVIV-64-201ENST00000518581 301 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC025881.1-201ENST00000518851 512 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 OR5AK1P-201ENST00000524837 922 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AP002884.5-201ENST00000595053 1132 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC012360.2-201ENST00000609349 391 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC078880.4-201ENST00000617627 1749 ntBASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
TRIM48Q8IWZ4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 Y_RNA.248-201ENST00000364501 109 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 SNORA62.2-201ENST00000364672 152 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 RN7SKP78-201ENST00000364711 318 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 MIR217-201ENST00000384817 110 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 RNU11-201ENST00000387069 134 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL031985.1-201ENST00000392713 418 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL096800.1-201ENST00000405326 893 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 OR8G2P-201ENST00000412796 908 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 EIF1P1-201ENST00000421436 341 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 Z93242.1-201ENST00000427102 353 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 RPL31P54-201ENST00000429803 370 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 UBE2V1P3-201ENST00000439651 417 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL663074.2-201ENST00000440621 479 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 MTND4P25-201ENST00000441039 533 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 RBMX2P4-201ENST00000441256 376 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AC023141.8-201ENST00000442554 208 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 NXT1P1-201ENST00000458481 316 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 ARL2BPP4-201ENST00000506854 471 ntBASIC5.75□□□□□ -1.49
TRIM48Q8IWZ4 PGBD4P4-201ENST00000509673 613 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms