Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RN7SKP157-201ENST00000516174 282 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 RNA5SP230-201ENST00000517039 122 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC020937.1-201ENST00000519677 1013 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AP001880.2-201ENST00000538233 448 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AL110118.1-201ENST00000553543 400 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 NPM1P47-201ENST00000560843 856 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC090666.1-201ENST00000578241 445 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 ZNF92P3-201ENST00000596594 954 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AL590392.1-201ENST00000604960 446 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC104763.3-201ENST00000613765 618 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 uc_338.9-201ENST00000617424 182 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC092376.2-201ENST00000622621 4116 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 IGKV7-3-201ENST00000357453 298 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AL590290.1-201ENST00000405336 380 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 CENPIP1-201ENST00000425713 902 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 BX323845.1-201ENST00000432417 179 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 RPL7P29-201ENST00000437151 728 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 RN7SL443P-201ENST00000464331 290 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 RPL21P6-201ENST00000479171 504 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 RN7SKP276-201ENST00000516242 268 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 FTH1P11-201ENST00000517577 551 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC010376.1-201ENST00000522101 334 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AP002812.4-201ENST00000532139 286 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 RN7SL690P-201ENST00000582087 240 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 BNIP3P40-201ENST00000596017 556 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC020910.3-201ENST00000603701 874 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC108738.1-201ENST00000603703 237 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AP002802.2-201ENST00000605877 235 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC010632.3-201ENST00000611377 369 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 MIR7973-1-201ENST00000614683 76 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC138907.10-201ENST00000623708 983 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC099654.9-201ENST00000637055 678 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 VN2R3P-201ENST00000422626 1412 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 MUC2-202ENST00000613187 4845 ntBASIC5.45□□□□□ -1.54
HERC6Q8IVU3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HERC6Q8IVU3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC005005.4-201ENST00000623789 16698 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC017007.4-201ENST00000503353 1352 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AC096656.1-201ENST00000623826 1364 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 FAM3C2-201ENST00000312214 681 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 RNU5B-4P-201ENST00000363508 111 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 RNA5SP479-201ENST00000364858 117 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 SNORA72.3-201ENST00000365074 132 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 DNAJC19P6-201ENST00000401853 280 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.44□□□□□ -1.54
HERC6Q8IVU3 RPL17P36-201ENST00000420302 549 ntBASIC5.44□□□□□ -1.54
HERC6Q8IVU3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms