Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 SSXP3-201ENST00000442971 1300 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC000123.3-201ENST00000624029 4975 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 Z95327.2-201ENST00000414579 1873 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 HSPA8P18-201ENST00000439846 1928 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHFQ7M4L6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHFQ7M4L6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC092747.4-201ENST00000620519 1861 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 RNA5SP335-201ENST00000363817 110 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC092745.2-202ENST00000411880 369 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 RPL24P2-201ENST00000421023 475 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 KCTD9P1-201ENST00000430462 1167 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 CDY14P-201ENST00000431260 1014 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC084290.1-201ENST00000434995 374 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL390119.1-201ENST00000440329 312 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 CDY12P-201ENST00000440679 1015 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 EEF1A1P39-201ENST00000440791 250 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 CDY13P-201ENST00000445813 1015 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 MTATP6P26-201ENST00000445926 662 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 CASP3P1-201ENST00000446037 609 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC112492.1-201ENST00000449607 712 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 CDY23P-201ENST00000451661 1014 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC011225.1-201ENST00000457751 369 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC091180.1-201ENST00000462104 372 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL133445.1-201ENST00000467051 452 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC100832.1-201ENST00000471945 383 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC022795.1-201ENST00000473808 480 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 RN7SL741P-201ENST00000482473 289 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC111193.1-201ENST00000504097 155 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 HPRT1P2-201ENST00000505250 544 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC108471.1-201ENST00000513977 287 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC119751.5-201ENST00000514077 770 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC005363.1-201ENST00000530779 351 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 BNIP3P1-201ENST00000547295 580 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 MTND4P33-201ENST00000556706 766 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC008751.2-201ENST00000597885 980 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC027243.2-201ENST00000602530 724 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL353600.1-201ENST00000608148 251 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC092106.3-201ENST00000611308 722 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC231759.1-201ENST00000616455 597 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AC126323.6-202ENST00000568092 3511 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 AL137100.1-201ENST00000556703 1620 ntBASIC4.61□□□□□ -1.67
SHFQ7M4L6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.61□□□□□ -1.67
SHFQ7M4L6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHFQ7M4L6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHFQ7M4L6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SHFQ7M4L6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SHFQ7M4L6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SHFQ7M4L6 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.6□□□□□ -1.67
SHFQ7M4L6 RNA5SP234-201ENST00000363916 119 ntBASIC4.6□□□□□ -1.67
SHFQ7M4L6 RNU1-146P-201ENST00000364015 165 ntBASIC4.6□□□□□ -1.67
SHFQ7M4L6 RN7SKP124-201ENST00000364730 341 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms