Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 Z92545.1-201ENST00000411782 234 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 UBE2Q2P12-201ENST00000414573 204 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 NMNAT1P2-201ENST00000435192 860 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 RPL23AP46-201ENST00000438548 490 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AC104978.1-201ENST00000449387 391 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 DDX39BP2-208ENST00000453923 258 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 RPS4XP15-201ENST00000489210 795 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AC005034.4-201ENST00000603612 899 ntBASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.92□□□□□ -1.3
SNAPC4Q5SXM2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AC116667.1-201ENST00000604855 2072 ntBASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 VPS35P1-201ENST00000563400 1518 ntBASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 MIR34B-201ENST00000385076 84 ntBASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 MRPL48P1-201ENST00000445390 636 ntBASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AC037471.2-201ENST00000564941 598 ntBASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 FP236240.3-201ENST00000623061 327 ntBASIC6.91□□□□□ -1.3
SNAPC4Q5SXM2 AC104623.2-202ENST00000623477 4002 ntBASIC6.9□□□□□ -1.3
SNAPC4Q5SXM2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNAPC4Q5SXM2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.9□□□□□ -1.3
SNAPC4Q5SXM2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNAPC4Q5SXM2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC6.9□□□□□ -1.3
SNAPC4Q5SXM2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 RNA5SP307-201ENST00000362863 116 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 Y_RNA.111-201ENST00000363248 100 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 SYF2P2-201ENST00000417620 583 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 BOLA3P4-201ENST00000418151 400 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 AC026427.2-201ENST00000506228 536 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 RN7SKP141-201ENST00000516167 338 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 AC091178.1-203ENST00000584586 279 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 Z98200.1-201ENST00000607298 470 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 AC007546.2-201ENST00000623996 360 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 AC024023.1-201ENST00000624530 922 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 AL034408.1-202ENST00000636088 415 ntBASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNAPC4Q5SXM2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 RNU1-83P-201ENST00000363426 164 ntBASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 SNORA57.3-201ENST00000411095 141 ntBASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 HSPE1P12-201ENST00000412576 301 ntBASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 IMMP1LP1-201ENST00000605170 488 ntBASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.89□□□□□ -1.31
SNAPC4Q5SXM2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SNAPC4Q5SXM2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNAPC4Q5SXM2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNAPC4Q5SXM2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SNAPC4Q5SXM2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNAPC4Q5SXM2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms