Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MTCO3P27-201ENST00000514397 196 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 Y_RNA.719-201ENST00000517156 106 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP41Q3LFD5 AL049839.1-201ENST00000556151 657 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 MIR4284-201ENST00000578924 81 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC090330.1-201ENST00000588646 764 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AL121932.1-201ENST00000605542 214 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC026790.2-201ENST00000606282 430 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AP005229.2-201ENST00000609980 697 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AL122125.1-201ENST00000616999 600 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AL731566.2-201ENST00000618971 317 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 HSPA8P19-201ENST00000505359 1517 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP41Q3LFD5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.16□□□□□ -1.58
USP41Q3LFD5 AC004817.4-201ENST00000602396 3625 ntBASIC5.16□□□□□ -1.58
USP41Q3LFD5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP41Q3LFD5 UGT2B26P-201ENST00000508672 1613 ntBASIC5.15□□□□□ -1.58
USP41Q3LFD5 AC007342.7-201ENST00000624610 2337 ntBASIC5.15□□□□□ -1.58
USP41Q3LFD5 Z95331.1-201ENST00000623075 23112 ntBASIC5.15□□□□□ -1.58
USP41Q3LFD5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
USP41Q3LFD5 RBPJP2-201ENST00000618187 1444 ntBASIC5.15□□□□□ -1.58
USP41Q3LFD5 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.15□□□□□ -1.58
USP41Q3LFD5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.58
USP41Q3LFD5 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
USP41Q3LFD5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
USP41Q3LFD5 AC017079.1-201ENST00000333650 415 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 RNU6-796P-201ENST00000391086 107 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 RSL24D1P1-201ENST00000404972 493 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC007738.1-201ENST00000413892 348 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 OR13Z1P-201ENST00000416141 834 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 QRSL1P2-201ENST00000418582 964 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC092017.2-201ENST00000427600 362 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 CNOT7P1-201ENST00000429006 852 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 RPL21P133-201ENST00000443666 476 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 CYCSP24-201ENST00000445119 316 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 CYCSP42-201ENST00000450823 238 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC021205.1-201ENST00000468797 348 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AK3P4-201ENST00000504283 583 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AP003355.1-201ENST00000518956 587 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AL358913.1-201ENST00000554342 121 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC116553.2-201ENST00000564203 463 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC068620.3-201ENST00000602749 560 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC063976.2-201ENST00000425667 3556 ntBASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
USP41Q3LFD5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP41Q3LFD5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 MTCO1P15-201ENST00000529569 1526 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 SAMMSON-213ENST00000641336 1521 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC083843.3-201ENST00000623679 2186 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 SNORA70F-201ENST00000384142 135 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL049697.2-201ENST00000403708 294 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 BX664727.1-201ENST00000416024 466 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC091390.1-201ENST00000433904 331 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC073052.1-201ENST00000440417 714 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 RPL7AP61-201ENST00000443410 636 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 RPS27P5-201ENST00000444247 244 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 TPT1P12-201ENST00000448968 492 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms