Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL354984.3-201ENST00000604803 325 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC025175.1-201ENST00000606482 759 ntBASIC5.24□□□□□ -1.57
RFX7Q2KHR2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX7Q2KHR2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 PRELID3BP10-201ENST00000431957 584 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL132765.1-201ENST00000434165 553 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 RPS27AP13-201ENST00000498403 237 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AC108145.1-201ENST00000503770 153 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AC007066.2-202ENST00000566531 914 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 IPO5P1-202ENST00000600039 287 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL161729.3-201ENST00000603533 673 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL021997.2-201ENST00000615674 271 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AC019278.1-201ENST00000623516 479 ntBASIC5.23□□□□□ -1.57
RFX7Q2KHR2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX7Q2KHR2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 RNU1-94P-201ENST00000362627 173 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 SNORA37-201ENST00000384504 129 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 MIR23B-201ENST00000384832 97 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 RPS26P8-201ENST00000393490 348 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 VN1R8P-201ENST00000407739 893 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 MFSD13B-201ENST00000420133 1290 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 SUMO2P4-201ENST00000504193 276 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 PHBP17-201ENST00000528576 541 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC006064.5-201ENST00000541782 248 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 OR7M1P-201ENST00000608946 533 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC024941.1-201ENST00000612250 334 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC100871.1-201ENST00000507871 1456 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC099654.3-201ENST00000447087 1546 ntBASIC5.22□□□□□ -1.57
RFX7Q2KHR2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX7Q2KHR2 AC093591.2-201ENST00000565254 3843 ntBASIC5.21□□□□□ -1.57
RFX7Q2KHR2 AC067945.1-201ENST00000342609 618 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 VDAC2P1-201ENST00000399358 958 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AL050305.1-201ENST00000399993 1230 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 PPIAP31-201ENST00000405422 495 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AL157831.1-201ENST00000426134 473 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AC073335.1-201ENST00000427776 363 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms