Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
FOXF1Q12946 SEPT7P2-202ENST00000398921 823 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 RNA5SP36-201ENST00000410197 133 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 AC011933.1-201ENST00000413334 321 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 PDSS1P1-201ENST00000422953 1114 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 EIF1P3-201ENST00000423841 334 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 AC073143.1-201ENST00000436316 395 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXF1Q12946 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXF1Q12946 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXF1Q12946 ABCF2P2-201ENST00000450549 296 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 AC116533.1-201ENST00000459748 321 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 RN7SL303P-201ENST00000469773 251 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 RN7SL481P-201ENST00000477764 299 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
FOXF1Q12946 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXF1Q12946 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXF1Q12946 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXF1Q12946 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXF1Q12946 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXF1Q12946 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXF1Q12946 AC019278.1-201ENST00000623516 479 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 AC011944.2-201ENST00000624440 683 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.89□□□□□ -1.79
FOXF1Q12946 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 VPS35P1-201ENST00000563400 1518 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
FOXF1Q12946 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXF1Q12946 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXF1Q12946 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXF1Q12946 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXF1Q12946 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
FOXF1Q12946 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXF1Q12946 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXF1Q12946 CDC27P2-201ENST00000425026 1922 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
FOXF1Q12946 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
FOXF1Q12946 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
FOXF1Q12946 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
FOXF1Q12946 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
FOXF1Q12946 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXF1Q12946 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXF1Q12946 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXF1Q12946 AL157831.1-201ENST00000426134 473 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AC016712.1-201ENST00000431088 378 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 PRELID3BP10-201ENST00000431957 584 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXF1Q12946 ACTR3P2-201ENST00000439585 1257 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXF1Q12946 AC009220.1-201ENST00000451614 275 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 PSMC1P13-201ENST00000458195 985 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 RPL35P6-201ENST00000490024 372 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 RN7SL691P-201ENST00000494487 301 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AC104164.2-201ENST00000496953 495 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 RNA5SP519-201ENST00000516480 119 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 IGLV3-26-201ENST00000520756 302 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 PHBP17-201ENST00000528576 541 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AC006064.5-201ENST00000541782 248 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 DYNLL1P4-201ENST00000549314 266 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXF1Q12946 AL109766.1-201ENST00000555080 552 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 PSMB7P1-201ENST00000556349 514 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AC018552.1-201ENST00000562099 811 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AF230666.2-201ENST00000602328 725 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXF1Q12946 AL023583.1-201ENST00000607518 1143 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 RNU6-84P-201ENST00000607737 102 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 LINC00901.1-201ENST00000617252 152 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AP000843.1-201ENST00000624880 701 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AC055839.1-201ENST00000634467 498 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 AC008013.2-202ENST00000637965 364 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
FOXF1Q12946 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXF1Q12946 NEAT1-202ENST00000501122 22743 ntBASIC3.88□□□□□ -1.79
FOXF1Q12946 CCT8P1-201ENST00000413611 1657 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXF1Q12946 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXF1Q12946 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXF1Q12946 FAM3C2-201ENST00000312214 681 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 AC126755.2-208ENST00000327792 462 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 AC138969.1-213ENST00000331436 462 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 RNU1-108P-201ENST00000362556 161 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 RNU1-14P-201ENST00000362759 152 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 RNU1-132P-201ENST00000364300 164 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXF1Q12946 VDAC2P1-201ENST00000399358 958 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 VN1R8P-201ENST00000407739 893 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 RN7SKP235-201ENST00000410662 305 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXF1Q12946 RPS23P10-201ENST00000416185 486 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 SKP1P3-201ENST00000429280 487 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 AL512326.1-201ENST00000443050 721 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXF1Q12946 H2AFZP6-201ENST00000444403 394 ntBASIC3.87□□□□□ -1.79
FOXF1Q12946 EEF1A1P1-201ENST00000447052 739 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms