Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.47□□□□□ -1.69
SCN1BQ07699 RNU6-1293P-201ENST00000384077 107 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 RNU1-77P-201ENST00000390868 162 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 CEACAMP8-201ENST00000413902 580 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 IPMKP1-201ENST00000425988 855 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.47□□□□□ -1.69
SCN1BQ07699 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN1BQ07699 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN1BQ07699 HSFY3P-201ENST00000444242 1191 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AL161636.2-201ENST00000445179 927 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 RHEBP2-201ENST00000450289 600 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN1BQ07699 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 RPS6P2-201ENST00000454208 705 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.47□□□□□ -1.69
SCN1BQ07699 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC100832.1-201ENST00000471945 383 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC090071.1-201ENST00000507713 644 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 HMGB1P40-201ENST00000525121 540 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 CR383656.14-201ENST00000551951 406 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 BLZF2P-201ENST00000553776 1130 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC022404.1-201ENST00000555320 273 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC095057.3-201ENST00000567102 1157 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.47□□□□□ -1.69
SCN1BQ07699 MIR1273E-201ENST00000581165 102 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC124283.4-201ENST00000581815 456 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.47□□□□□ -1.69
SCN1BQ07699 RPL26P30-202ENST00000602923 645 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC015982.1-201ENST00000608113 465 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC021851.1-201ENST00000608537 1082 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 RNU6-156P-201ENST00000621869 107 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.47□□□□□ -1.69
SCN1BQ07699 MIR1910-201ENST00000636955 80 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 DHX9P1-201ENST00000436565 3076 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC083899.2-201ENST00000423285 1376 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 AL359922.3-201ENST00000624779 1670 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 OR51H2P-202ENST00000641424 3046 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SCN1BQ07699 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SCN1BQ07699 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SCN1BQ07699 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SCN1BQ07699 ASNSP1-204ENST00000641977 1664 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SCN1BQ07699 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN1BQ07699 RNA5SP28-201ENST00000363841 119 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SCN1BQ07699 PRRC2CP1-201ENST00000404428 159 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 MIR1282-201ENST00000408865 101 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.46□□□□□ -1.7
SCN1BQ07699 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.46□□□□□ -1.7
SCN1BQ07699 RPL7P4-203ENST00000430239 730 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 CYCSP6-201ENST00000434498 302 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 CLUHP1-201ENST00000435012 1190 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 Z80107.2-201ENST00000445127 392 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 GXYLT1P1-201ENST00000446657 490 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC004980.3-201ENST00000447046 365 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 GAPDHP25-201ENST00000447061 1001 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.46□□□□□ -1.7
SCN1BQ07699 GTF2IP12-201ENST00000456547 356 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC091180.1-201ENST00000462104 372 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.46□□□□□ -1.7
SCN1BQ07699 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 RN7SKP82-201ENST00000516786 223 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.46□□□□□ -1.7
SCN1BQ07699 DEFB109D-201ENST00000529497 240 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms