Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS1Q01581 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC125257.1-201ENST00000560400 2930 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 DHX40P1-201ENST00000588725 1412 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 OR4K15-201ENST00000305051 1216 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 RNU1-15P-201ENST00000353977 144 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 RNA5SP505-201ENST00000364748 108 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 RNU6-398P-201ENST00000384143 109 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 GLULP6-201ENST00000399502 913 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 AL139039.2-201ENST00000407436 479 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC092570.3-201ENST00000420113 693 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 PPBPP1-201ENST00000510807 373 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 MTND2P13-201ENST00000577438 1039 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC069061.3-201ENST00000582254 823 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC138473.1-201ENST00000605717 526 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 AC100847.1-201ENST00000611316 481 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.22□□□□□ -1.73
HMGCS1Q01581 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HMGCS1Q01581 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS1Q01581 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HMGCS1Q01581 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.21□□□□□ -1.73
HMGCS1Q01581 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HMGCS1Q01581 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.21□□□□□ -1.73
HMGCS1Q01581 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.21□□□□□ -1.73
HMGCS1Q01581 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
HMGCS1Q01581 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HMGCS1Q01581 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS1Q01581 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 RNU1-130P-201ENST00000363930 160 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 MT-RNR1-201ENST00000389680 954 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL512430.2-201ENST00000406786 339 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL139095.3-201ENST00000419672 1203 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 UQCRBP1-201ENST00000421129 336 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC011753.3-201ENST00000443436 406 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL162591.2-201ENST00000449634 317 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 RPL10P17-201ENST00000453852 316 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 RPS29P33-201ENST00000456717 146 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 SEPT7P6-201ENST00000469999 1143 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS1Q01581 ATP1B1P1-201ENST00000509767 915 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC015795.1-201ENST00000513669 327 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 snoU109.6-201ENST00000516831 118 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 OR5AN2P-201ENST00000534535 896 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC011270.1-201ENST00000558606 583 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC009303.3-201ENST00000591103 736 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 AC020763.5-201ENST00000623298 430 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL596275.2-204ENST00000641628 552 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 AL596275.2-206ENST00000641957 626 ntBASIC4.21□□□□□ -1.74
HMGCS1Q01581 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms