Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PRKDCP78527 AP001284.1-201ENST00000528393 2118 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 RN7SKP167-201ENST00000411047 285 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 SNORA74C-2-201ENST00000411179 201 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 CYCSP4-201ENST00000429682 331 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 AC021660.1-201ENST00000465006 554 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AGGF1P3-201ENST00000493675 1213 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.95□□□□□ -1.94
PRKDCP78527 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.95□□□□□ -1.94
PRKDCP78527 MIR5187-201ENST00000583479 76 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 MIR4660-201ENST00000583549 74 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PRKDCP78527 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 RPL23AP57-201ENST00000332361 466 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 XGY1-201ENST00000381172 446 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC013429.2-201ENST00000418798 781 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 PTP4A1P3-201ENST00000433661 420 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 APOA2-207ENST00000470459 416 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC097462.2-201ENST00000504623 481 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC006960.3-201ENST00000561845 705 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 RPL23AP97-201ENST00000568955 471 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC005034.4-201ENST00000603612 899 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC073530.2-201ENST00000623987 261 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 NACA-203ENST00000454682 6629 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKDCP78527 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 CDY11P-201ENST00000447168 1651 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 RNA5SP126-201ENST00000365092 109 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC008065.1-201ENST00000428525 348 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC104619.4-201ENST00000510773 249 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC111000.6-201ENST00000514471 709 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC105031.1-201ENST00000518550 476 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC020914.6-201ENST00000594327 272 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC2.95□□□□□ -1.94
PRKDCP78527 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC114878.2-201ENST00000604863 1251 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AF001550.2-201ENST00000636643 217 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKDCP78527 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
PRKDCP78527 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 CKS1BP6-201ENST00000424932 240 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 OR52E3P-201ENST00000452083 936 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 AC018635.1-201ENST00000468292 1030 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 RPS3AP6-201ENST00000484430 795 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.94□□□□□ -1.94
PRKDCP78527 TUG1_1.1-201ENST00000610654 145 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC2.94□□□□□ -1.94
PRKDCP78527 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC2.94□□□□□ -1.94
PRKDCP78527 MTCO1P24-201ENST00000515438 1558 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PRKDCP78527 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.94□□□□□ -1.94
PRKDCP78527 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKDCP78527 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 RANP9-201ENST00000519957 271 ntBASIC2.94□□□□□ -1.94
PRKDCP78527 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.94□□□□□ -1.94
PRKDCP78527 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms