Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.21□□□□□ -1.58
HDAC4P56524 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC4P56524 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HDAC4P56524 RNA5SP428-201ENST00000365129 132 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HDAC4P56524 RPS24P12-201ENST00000402084 394 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 UBE2V1P11-201ENST00000411559 285 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC4P56524 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC4P56524 RPL35AP21-201ENST00000437667 333 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 OTX2P1-201ENST00000450956 354 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 RNU7-27P-201ENST00000459281 62 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 FTH1P2-201ENST00000466086 412 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC109462.1-201ENST00000491087 368 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC073073.1-201ENST00000493920 463 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 OR5H3P-201ENST00000502817 919 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC4P56524 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC4P56524 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 RNA5SP464-201ENST00000516251 108 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC105031.1-201ENST00000518550 476 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC4P56524 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC4P56524 AC011840.5-201ENST00000582125 771 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 SS18L2P2-201ENST00000583960 235 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 MEMO1P5-201ENST00000604810 406 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC021851.1-201ENST00000608537 1082 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 AC093875.1-201ENST00000623688 504 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC4P56524 AL596275.2-204ENST00000641628 552 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 AL596275.2-206ENST00000641957 626 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC4P56524 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC4P56524 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC4P56524 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC4P56524 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC4P56524 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.2□□□□□ -1.58
HDAC4P56524 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC4P56524 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC4P56524 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC4P56524 AP000542.2-201ENST00000623199 6179 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC4P56524 RNA5SP507-201ENST00000363603 121 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 RN7SKP103-201ENST00000363848 320 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 RNU6-1005P-201ENST00000384519 107 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC4P56524 MTATP6P31-201ENST00000406985 692 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC4P56524 GJA6P-201ENST00000415117 1042 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AC013429.2-201ENST00000418798 781 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.19□□□□□ -1.58
HDAC4P56524 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC4P56524 DPY19L1P2-201ENST00000426647 915 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AC013262.1-201ENST00000426710 252 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 FO393414.1-201ENST00000428697 1184 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC4P56524 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.19□□□□□ -1.58
HDAC4P56524 MTCO1P43-201ENST00000431831 488 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC4P56524 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC4P56524 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC4P56524 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC4P56524 AL606517.1-201ENST00000446914 387 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC4P56524 AL356981.1-201ENST00000454879 684 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC4P56524 AC022795.1-201ENST00000473808 480 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 RN7SL244P-201ENST00000493405 297 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC4P56524 AC133963.2-201ENST00000513686 578 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AC013701.1-201ENST00000522657 465 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC4P56524 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.19□□□□□ -1.58
HDAC4P56524 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC4P56524 AC005377.1-201ENST00000605126 456 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AC009163.6-201ENST00000612367 342 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 LINC00901.1-201ENST00000617252 152 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 AP002967.1-201ENST00000624203 539 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC4P56524 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC4P56524 AL672167.1-204ENST00000641875 3017 ntBASIC5.19□□□□□ -1.58
HDAC4P56524 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC4P56524 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC4P56524 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms