Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC010329.2-201ENST00000595195 2737 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 MTCO1P8-201ENST00000416914 1523 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 MFSD8-242ENST00000641690 4199 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.35□□□□□ -1.71
PKNOX1P55347 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 RNU6-1251P-201ENST00000364502 107 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AL645927.1-201ENST00000396783 406 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AL035696.2-201ENST00000407941 709 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.35□□□□□ -1.71
PKNOX1P55347 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AC073335.1-201ENST00000427776 363 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.35□□□□□ -1.71
PKNOX1P55347 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.35□□□□□ -1.71
PKNOX1P55347 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AL157884.3-201ENST00000448273 1184 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 HIGD1AP8-201ENST00000453927 274 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AC069277.2-201ENST00000454211 432 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 RN7SL809P-201ENST00000482040 297 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.35□□□□□ -1.71
PKNOX1P55347 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PKNOX1P55347 RNA5SP497-201ENST00000516081 97 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 RNA5SP228-201ENST00000516232 133 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 IGKV1-32-201ENST00000519290 311 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.35□□□□□ -1.71
PKNOX1P55347 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.35□□□□□ -1.71
PKNOX1P55347 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 UBE2FP2-201ENST00000566646 462 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.35□□□□□ -1.71
PKNOX1P55347 OR7E18P-201ENST00000592589 702 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AC008638.3-201ENST00000603341 463 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AC067931.1-201ENST00000624190 671 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 CASC19-222ENST00000641321 1173 ntBASIC4.35□□□□□ -1.71
PKNOX1P55347 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PKNOX1P55347 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PKNOX1P55347 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PKNOX1P55347 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PKNOX1P55347 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PKNOX1P55347 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PKNOX1P55347 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PKNOX1P55347 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PKNOX1P55347 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.34□□□□□ -1.71
PKNOX1P55347 AC007342.7-201ENST00000624610 2337 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKNOX1P55347 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKNOX1P55347 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PKNOX1P55347 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKNOX1P55347 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PKNOX1P55347 RNU6-178P-201ENST00000384631 104 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 AL645733.1-201ENST00000402250 217 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKNOX1P55347 MTCYBP7-201ENST00000419540 1134 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 GAPDHP49-201ENST00000421421 961 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 RPS12P10-201ENST00000427031 377 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 RPL23AP4-201ENST00000427757 463 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 AL049745.1-201ENST00000433953 286 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 RPL23AP93-201ENST00000440847 484 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 AC073648.4-201ENST00000442655 781 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 TXNP2-201ENST00000443918 295 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.34□□□□□ -1.71
PKNOX1P55347 STRADBP1-201ENST00000478954 1281 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.34□□□□□ -1.71
PKNOX1P55347 HAUS1P1-201ENST00000505275 832 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.34□□□□□ -1.71
PKNOX1P55347 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.34□□□□□ -1.71
PKNOX1P55347 RNU6-751P-201ENST00000516382 101 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 MTCYBP19-201ENST00000517463 1124 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.34□□□□□ -1.71
PKNOX1P55347 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.34□□□□□ -1.71
PKNOX1P55347 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 HMGB3P26-201ENST00000560051 582 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.34□□□□□ -1.71
PKNOX1P55347 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
PKNOX1P55347 AC133644.2-201ENST00000608142 540 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 SDR42E1P1-201ENST00000611327 477 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PKNOX1P55347 AC105105.5-201ENST00000622635 1294 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 LINC01808-202ENST00000641680 1116 ntBASIC4.34□□□□□ -1.71
PKNOX1P55347 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKNOX1P55347 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.34□□□□□ -1.71
PKNOX1P55347 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.34□□□□□ -1.71
PKNOX1P55347 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms