Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC231759.1-201ENST00000616455 597 ntBASIC5.42□□□□□ -1.54
COPB1P53618 RPL23AP61-201ENST00000623642 466 ntBASIC5.42□□□□□ -1.54
COPB1P53618 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.42□□□□□ -1.54
COPB1P53618 CASC19-264ENST00000641912 1184 ntBASIC5.42□□□□□ -1.54
COPB1P53618 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.42□□□□□ -1.54
COPB1P53618 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 DDX18P5-201ENST00000534547 1306 ntBASIC5.42□□□□□ -1.54
COPB1P53618 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 ECM1P2-201ENST00000503354 1577 ntBASIC5.42□□□□□ -1.54
COPB1P53618 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.41□□□□□ -1.54
COPB1P53618 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 MTCYBP7-201ENST00000419540 1134 ntBASIC5.41□□□□□ -1.54
COPB1P53618 EIF4A1P1-201ENST00000420241 934 ntBASIC5.41□□□□□ -1.54
COPB1P53618 OR2X1P-201ENST00000421144 687 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC092162.1-201ENST00000432828 434 ntBASIC5.41□□□□□ -1.54
COPB1P53618 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 OR52B5P-201ENST00000435337 951 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 RPL34P20-201ENST00000442771 351 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 KNOP1P3-201ENST00000446933 426 ntBASIC5.41□□□□□ -1.54
COPB1P53618 HMGB1P5-202ENST00000451497 985 ntBASIC5.41□□□□□ -1.54
COPB1P53618 RPL5P13-201ENST00000462840 709 ntBASIC5.41□□□□□ -1.54
COPB1P53618 NDUFA5P9-201ENST00000472609 340 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 AC105313.1-201ENST00000509121 353 ntBASIC5.41□□□□□ -1.54
COPB1P53618 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 RFPL4AP3-201ENST00000515267 345 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 MRPS36P3-201ENST00000519284 130 ntBASIC5.41□□□□□ -1.54
COPB1P53618 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 AP003717.3-201ENST00000544832 1180 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.41□□□□□ -1.54
COPB1P53618 AC145350.1-201ENST00000567426 208 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 MTND3P13-201ENST00000574391 343 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.41□□□□□ -1.54
COPB1P53618 Z82195.1-201ENST00000604558 398 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AC024060.1-201ENST00000607052 494 ntBASIC5.41□□□□□ -1.54
COPB1P53618 AL136295.6-201ENST00000610486 658 ntBASIC5.41□□□□□ -1.54
COPB1P53618 MIR6798-201ENST00000612887 67 ntBASIC5.41□□□□□ -1.54
COPB1P53618 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 OR52B5P-202ENST00000641118 1110 ntBASIC5.41□□□□□ -1.54
COPB1P53618 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
COPB1P53618 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 DHX9P1-201ENST00000436565 3076 ntBASIC5.41□□□□□ -1.54
COPB1P53618 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPB1P53618 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
COPB1P53618 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COPB1P53618 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COPB1P53618 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.4□□□□□ -1.54
COPB1P53618 AC126323.6-202ENST00000568092 3511 ntBASIC5.4□□□□□ -1.54
COPB1P53618 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 MIR223-201ENST00000385204 110 ntBASIC5.4□□□□□ -1.54
COPB1P53618 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 AC119751.3-201ENST00000399720 670 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AL049545.1-201ENST00000401856 572 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AL592291.1-201ENST00000403830 352 ntBASIC5.4□□□□□ -1.54
COPB1P53618 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 AL449283.1-202ENST00000418249 604 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.4□□□□□ -1.54
COPB1P53618 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.4□□□□□ -1.54
COPB1P53618 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 AL096803.2-201ENST00000450032 677 ntBASIC5.4□□□□□ -1.54
COPB1P53618 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.4□□□□□ -1.54
COPB1P53618 AL645937.3-201ENST00000453647 936 ntBASIC5.4□□□□□ -1.54
COPB1P53618 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.4□□□□□ -1.54
COPB1P53618 VN1R40P-201ENST00000455196 941 ntBASIC5.4□□□□□ -1.54
COPB1P53618 AC112206.1-201ENST00000468416 477 ntBASIC5.4□□□□□ -1.54
COPB1P53618 COPS8P2-201ENST00000473228 627 ntBASIC5.4□□□□□ -1.54
COPB1P53618 UBA52P7-201ENST00000486088 380 ntBASIC5.4□□□□□ -1.54
COPB1P53618 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 AC024558.1-201ENST00000505008 528 ntBASIC5.4□□□□□ -1.54
COPB1P53618 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPB1P53618 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.4□□□□□ -1.54
COPB1P53618 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms