Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL12P48061 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.38□□□□□ -1.71
CXCL12P48061 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL12P48061 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
CXCL12P48061 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL12P48061 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.38□□□□□ -1.71
CXCL12P48061 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL12P48061 AC099522.1-202ENST00000514718 367 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.38□□□□□ -1.71
CXCL12P48061 AC068993.1-201ENST00000546724 589 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.38□□□□□ -1.71
CXCL12P48061 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.38□□□□□ -1.71
CXCL12P48061 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.38□□□□□ -1.71
CXCL12P48061 AC023762.1-201ENST00000603280 584 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 FAM27D1-201ENST00000612308 341 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CXCL12P48061 AC067931.1-201ENST00000624190 671 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 AC010608.2-201ENST00000624830 470 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 FRG1EP-201ENST00000634469 770 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 HCFC2P1-201ENST00000392864 1592 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 AL133243.3-201ENST00000617415 3004 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 OR51H2P-202ENST00000641424 3046 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL12P48061 AC139769.1-204ENST00000472297 1931 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL12P48061 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CXCL12P48061 TTC39DP-201ENST00000416781 1688 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 AC003985.2-201ENST00000562268 1669 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CXCL12P48061 CASC19-206ENST00000641028 1430 ntBASIC4.38□□□□□ -1.71
CXCL12P48061 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CXCL12P48061 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL12P48061 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL12P48061 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL12P48061 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 AC092162.3-201ENST00000624511 1624 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 RNU1-14P-201ENST00000362759 152 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 RNA5SP387-201ENST00000364226 106 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 ENSAP1-201ENST00000392855 326 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 RNA5SP36-201ENST00000410197 133 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 RNA5SP296-201ENST00000410523 111 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 RN7SKP182-201ENST00000410772 298 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 OR8F1P-201ENST00000425243 930 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 RPL21P43-201ENST00000425440 472 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL12P48061 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL12P48061 MRPL48P1-201ENST00000445390 636 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 AC021660.1-201ENST00000465006 554 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
CXCL12P48061 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL12P48061 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 RNA5SP519-201ENST00000516480 119 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.37□□□□□ -1.71
CXCL12P48061 AP005901.4-201ENST00000577336 569 ntBASIC4.37□□□□□ -1.71
CXCL12P48061 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL12P48061 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CXCL12P48061 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL12P48061 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL12P48061 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL12P48061 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL12P48061 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL12P48061 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL12P48061 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL12P48061 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL12P48061 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL12P48061 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL12P48061 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL12P48061 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CXCL12P48061 MIR208A-201ENST00000362287 71 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CXCL12P48061 RNU6-761P-201ENST00000384148 107 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL12P48061 RN7SKP235-201ENST00000410662 305 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 RPS20P14-201ENST00000412545 360 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 OR8G2P-201ENST00000412796 908 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL12P48061 AC104333.2-201ENST00000422630 192 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 AL157831.1-201ENST00000426134 473 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 HSPE1P16-201ENST00000426640 348 ntBASIC4.36□□□□□ -1.71
CXCL12P48061 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL12P48061 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL12P48061 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.36□□□□□ -1.71
CXCL12P48061 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL12P48061 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.36□□□□□ -1.71
CXCL12P48061 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.36□□□□□ -1.71
CXCL12P48061 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL12P48061 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL12P48061 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL12P48061 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL12P48061 AC010503.3-201ENST00000594355 540 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms