Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 OR11J2P-201ENST00000555298 907 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.82□□□□□ -1.64
CASQ1P31415 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.82□□□□□ -1.64
CASQ1P31415 AC124068.1-201ENST00000563131 678 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.82□□□□□ -1.64
CASQ1P31415 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.82□□□□□ -1.64
CASQ1P31415 AC005726.4-201ENST00000582858 458 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 AC020914.4-201ENST00000597690 277 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 AC093799.2-201ENST00000610062 578 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 AC123768.4-201ENST00000616244 701 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 AC007546.2-201ENST00000623996 360 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.82□□□□□ -1.64
CASQ1P31415 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CASQ1P31415 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CASQ1P31415 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.82□□□□□ -1.64
CASQ1P31415 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CASQ1P31415 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CASQ1P31415 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CASQ1P31415 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CASQ1P31415 AC017007.4-201ENST00000503353 1352 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CASQ1P31415 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CASQ1P31415 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CASQ1P31415 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.81□□□□□ -1.64
CASQ1P31415 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CASQ1P31415 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CASQ1P31415 RNA5SP307-201ENST00000362863 116 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CASQ1P31415 TRIM60P17-201ENST00000415181 719 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.81□□□□□ -1.64
CASQ1P31415 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.81□□□□□ -1.64
CASQ1P31415 RPL7P4-203ENST00000430239 730 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 CFL1P1-202ENST00000432948 411 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 PPIAP17-201ENST00000438507 471 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.81□□□□□ -1.64
CASQ1P31415 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.81□□□□□ -1.64
CASQ1P31415 VN1R32P-201ENST00000452234 905 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 RPS5P7-201ENST00000456664 608 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 OR2AO1P-201ENST00000476497 403 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AC140172.1-201ENST00000502928 141 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 SNRPCP2-201ENST00000504370 475 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AC024558.1-201ENST00000505008 528 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.81□□□□□ -1.64
CASQ1P31415 AC005363.1-201ENST00000530779 351 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 UBTFL9-201ENST00000534504 1148 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 TOMM20P2-201ENST00000540082 421 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.81□□□□□ -1.64
CASQ1P31415 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.81□□□□□ -1.64
CASQ1P31415 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.81□□□□□ -1.64
CASQ1P31415 AL160290.3-201ENST00000604869 165 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AL391358.1-201ENST00000605342 190 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AL713922.2-201ENST00000619384 716 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 AC103858.2-201ENST00000621471 543 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CASQ1P31415 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.81□□□□□ -1.64
CASQ1P31415 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CASQ1P31415 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.81□□□□□ -1.64
CASQ1P31415 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CASQ1P31415 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CASQ1P31415 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.81□□□□□ -1.64
CASQ1P31415 AC097504.1-201ENST00000515103 2415 ntBASIC4.81□□□□□ -1.64
CASQ1P31415 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.81□□□□□ -1.64
CASQ1P31415 AC083899.2-201ENST00000423285 1376 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CASQ1P31415 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.8□□□□□ -1.64
CASQ1P31415 VN1R12P-201ENST00000403778 876 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.8□□□□□ -1.64
CASQ1P31415 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.8□□□□□ -1.64
CASQ1P31415 AC097523.2-201ENST00000435551 652 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CASQ1P31415 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.8□□□□□ -1.64
CASQ1P31415 RPL23AP71-201ENST00000470966 469 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 OR52A4P-201ENST00000472867 958 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AC022336.1-201ENST00000475510 337 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.8□□□□□ -1.64
CASQ1P31415 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.8□□□□□ -1.64
CASQ1P31415 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.8□□□□□ -1.64
CASQ1P31415 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.8□□□□□ -1.64
CASQ1P31415 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.8□□□□□ -1.64
CASQ1P31415 PHBP17-201ENST00000528576 541 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.8□□□□□ -1.64
CASQ1P31415 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.8□□□□□ -1.64
CASQ1P31415 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.8□□□□□ -1.64
CASQ1P31415 AL161713.1-201ENST00000555538 145 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.8□□□□□ -1.64
CASQ1P31415 RN7SL652P-201ENST00000577769 300 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.8□□□□□ -1.64
CASQ1P31415 AC008521.2-201ENST00000591021 259 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CASQ1P31415 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.8□□□□□ -1.64
CASQ1P31415 HMGB1P50-201ENST00000605814 607 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 Z98200.1-201ENST00000607298 470 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.8□□□□□ -1.64
CASQ1P31415 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 AC233309.1-201ENST00000619522 751 ntBASIC4.8□□□□□ -1.64
CASQ1P31415 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.8□□□□□ -1.64
CASQ1P31415 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.8□□□□□ -1.64
CASQ1P31415 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms