Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SNORA5.1-201ENST00000384275 131 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HOXA11P31270 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 ATG4AP1-201ENST00000416893 538 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 AL451139.1-201ENST00000434718 346 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 RPL35AP21-201ENST00000437667 333 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 CACYBPP1-201ENST00000438592 684 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 Z99127.2-201ENST00000441426 334 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 ELOCP13-201ENST00000443934 329 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 CYCSP24-201ENST00000445119 316 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 MTND1P33-201ENST00000446251 917 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA11P31270 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 AC093166.2-201ENST00000455969 1017 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 AC245028.2-201ENST00000458673 253 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 AC021146.5-201ENST00000503544 545 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 PRELID3BP6-201ENST00000503839 571 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 NAMPTP2-201ENST00000505629 1115 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA11P31270 AC119751.5-201ENST00000514077 770 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 RNU1-6P-201ENST00000516290 144 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 RNU6-889P-201ENST00000517189 103 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 NPM1P35-201ENST00000533043 868 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 LRRC34P1-201ENST00000542742 915 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 AC233266.2-201ENST00000567067 528 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.2□□□□□ -1.58
HOXA11P31270 AC005412.1-201ENST00000580812 1049 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA11P31270 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 AL133247.2-201ENST00000603236 482 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 MIR6798-201ENST00000612887 67 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 AP000648.2-201ENST00000624182 404 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 AC019226.2-201ENST00000625973 424 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA11P31270 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
HOXA11P31270 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
HOXA11P31270 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
HOXA11P31270 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA11P31270 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HOXA11P31270 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA11P31270 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA11P31270 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA11P31270 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXA11P31270 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA11P31270 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA11P31270 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXA11P31270 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA11P31270 AP000473.2-201ENST00000602659 1537 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA11P31270 AC005332.5-201ENST00000591222 2919 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 GVINP1-202ENST00000531871 7271 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 OR4K15-201ENST00000305051 1216 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 AC126755.2-208ENST00000327792 462 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 AC138969.1-213ENST00000331436 462 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA11P31270 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 SNORD113.2-201ENST00000364166 89 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 RNU1-82P-201ENST00000390851 165 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 AL512430.2-201ENST00000406786 339 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA11P31270 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA11P31270 ARL5AP3-201ENST00000439327 386 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA11P31270 RPL7P33-201ENST00000444159 742 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA11P31270 MTND2P8-201ENST00000450555 1025 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA11P31270 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA11P31270 AC104164.3-201ENST00000467363 1258 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA11P31270 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA11P31270 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA11P31270 CEACAMP10-202ENST00000495431 496 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXA11P31270 AC111000.3-201ENST00000508057 576 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 AC005351.1-201ENST00000511152 786 ntBASIC5.19□□□□□ -1.58
HOXA11P31270 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms