Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM4SF1P30408 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.63□□□□□ -1.51
TM4SF1P30408 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TM4SF1P30408 AL034370.1-201ENST00000397254 1590 ntBASIC5.63□□□□□ -1.51
TM4SF1P30408 LINC00622-201ENST00000562811 1570 ntBASIC5.63□□□□□ -1.51
TM4SF1P30408 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.63□□□□□ -1.51
TM4SF1P30408 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
TM4SF1P30408 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.62□□□□□ -1.51
TM4SF1P30408 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
TM4SF1P30408 AC068870.3-201ENST00000625077 2536 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 MIR3065-201ENST00000390137 79 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AL136131.1-201ENST00000406079 803 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 RN7SKP202-201ENST00000410439 330 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 RNA5SP44-201ENST00000410446 133 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.62□□□□□ -1.51
TM4SF1P30408 EIF4HP2-201ENST00000424380 563 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 AL117339.2-201ENST00000430475 180 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AC004938.1-201ENST00000438468 308 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 MTCYBP12-201ENST00000440559 1134 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.62□□□□□ -1.51
TM4SF1P30408 CABYRP1-201ENST00000465493 1045 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 CR383656.1-201ENST00000484916 377 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AL132838.2-201ENST00000492041 314 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.62□□□□□ -1.51
TM4SF1P30408 MTND3P24-201ENST00000506306 329 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 MTCO1P31-201ENST00000506355 492 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.62□□□□□ -1.51
TM4SF1P30408 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.62□□□□□ -1.51
TM4SF1P30408 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
TM4SF1P30408 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.62□□□□□ -1.51
TM4SF1P30408 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.62□□□□□ -1.51
TM4SF1P30408 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.62□□□□□ -1.51
TM4SF1P30408 AC006116.5-201ENST00000591936 559 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AC092474.3-201ENST00000603022 568 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.62□□□□□ -1.51
TM4SF1P30408 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 AC112484.5-201ENST00000624189 228 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 FRG1EP-201ENST00000634469 770 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TM4SF1P30408 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TM4SF1P30408 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TM4SF1P30408 SNX18P3-202ENST00000565670 1750 ntBASIC5.62□□□□□ -1.51
TM4SF1P30408 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
TM4SF1P30408 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM4SF1P30408 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
TM4SF1P30408 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 UBBP2-201ENST00000376781 231 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TM4SF1P30408 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 EIF4A1P3-201ENST00000411521 244 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 USP9YP19-201ENST00000412165 485 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 OR6K4P-201ENST00000423179 955 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.61□□□□□ -1.51
TM4SF1P30408 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 SEPT7P3-201ENST00000455017 621 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 MTND2P30-201ENST00000456663 382 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AC245028.2-201ENST00000458673 253 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.61□□□□□ -1.51
TM4SF1P30408 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.61□□□□□ -1.51
TM4SF1P30408 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 AC008628.1-201ENST00000508663 265 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AC008958.1-201ENST00000511047 682 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.61□□□□□ -1.51
TM4SF1P30408 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.61□□□□□ -1.51
TM4SF1P30408 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.61□□□□□ -1.51
TM4SF1P30408 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.61□□□□□ -1.51
TM4SF1P30408 AC027176.2-201ENST00000559166 746 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AC005242.1-201ENST00000585658 438 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AC242628.1-201ENST00000606810 391 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.61□□□□□ -1.51
TM4SF1P30408 AC015804.1-201ENST00000622935 435 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AL356863.1-201ENST00000623378 1080 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 AC073869.7-201ENST00000640874 297 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TM4SF1P30408 AC109446.4-201ENST00000623235 2755 ntBASIC5.61□□□□□ -1.51
TM4SF1P30408 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TM4SF1P30408 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms