Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD40P25942 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40P25942 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 NLRP3P1-201ENST00000622303 1785 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC007406.5-201ENST00000570140 3170 ntBASIC5.3□□□□□ -1.56
CD40P25942 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
CD40P25942 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40P25942 AL121972.1-201ENST00000402023 252 ntBASIC5.3□□□□□ -1.56
CD40P25942 VN1R8P-201ENST00000407739 893 ntBASIC5.3□□□□□ -1.56
CD40P25942 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.3□□□□□ -1.56
CD40P25942 RN7SKP33-201ENST00000410942 340 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40P25942 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40P25942 RPL12P12-201ENST00000424633 501 ntBASIC5.3□□□□□ -1.56
CD40P25942 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40P25942 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 AL645937.3-201ENST00000453647 936 ntBASIC5.3□□□□□ -1.56
CD40P25942 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 AC010301.1-201ENST00000473936 355 ntBASIC5.3□□□□□ -1.56
CD40P25942 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 RPL37P25-201ENST00000507308 276 ntBASIC5.3□□□□□ -1.56
CD40P25942 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 MTND4LP26-201ENST00000518144 282 ntBASIC5.3□□□□□ -1.56
CD40P25942 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40P25942 PMS2P3-207ENST00000529061 717 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40P25942 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40P25942 ZNF519P3-201ENST00000557158 1032 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC091489.2-201ENST00000566263 604 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 BNIP3P11-201ENST00000603878 563 ntBASIC5.3□□□□□ -1.56
CD40P25942 SEPT7P9-203ENST00000604116 343 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC010200.2-201ENST00000605098 235 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC141002.1-201ENST00000607025 279 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC138749.5-201ENST00000611461 208 ntBASIC5.3□□□□□ -1.56
CD40P25942 AL589743.7-201ENST00000612637 233 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC013476.2-201ENST00000614456 459 ntBASIC5.3□□□□□ -1.56
CD40P25942 U6atac.1-201ENST00000616025 117 ntBASIC5.3□□□□□ -1.56
CD40P25942 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.3□□□□□ -1.56
CD40P25942 AL137067.2-201ENST00000621202 131 ntBASIC5.3□□□□□ -1.56
CD40P25942 AC024587.1-201ENST00000505925 2157 ntBASIC5.3□□□□□ -1.56
CD40P25942 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40P25942 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40P25942 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40P25942 LINC02019-201ENST00000608605 2060 ntBASIC5.3□□□□□ -1.56
CD40P25942 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40P25942 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40P25942 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40P25942 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CD40P25942 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40P25942 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD40P25942 AC005034.3-201ENST00000604845 1747 ntBASIC5.29□□□□□ -1.56
CD40P25942 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD40P25942 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40P25942 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.29□□□□□ -1.56
CD40P25942 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD40P25942 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD40P25942 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD40P25942 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40P25942 RNU6-921P-201ENST00000384361 107 ntBASIC5.29□□□□□ -1.56
CD40P25942 DSTNP4-201ENST00000399472 474 ntBASIC5.29□□□□□ -1.56
CD40P25942 RPS24P12-201ENST00000402084 394 ntBASIC5.29□□□□□ -1.56
CD40P25942 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40P25942 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.29□□□□□ -1.56
CD40P25942 RN7SKP56-201ENST00000410513 331 ntBASIC5.29□□□□□ -1.56
CD40P25942 HMGN1P20-201ENST00000411849 300 ntBASIC5.29□□□□□ -1.56
CD40P25942 AL096829.1-201ENST00000413677 457 ntBASIC5.29□□□□□ -1.56
CD40P25942 RPL21P32-201ENST00000419877 477 ntBASIC5.29□□□□□ -1.56
CD40P25942 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.29□□□□□ -1.56
CD40P25942 RPS27AP14-201ENST00000422868 454 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms