Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 OR51A6P-201ENST00000418680 1004 ntBASIC4.28□□□□□ -1.72
SDC1P18827 CENPIP1-201ENST00000425713 902 ntBASIC4.28□□□□□ -1.72
SDC1P18827 RPS12P10-201ENST00000427031 377 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC1P18827 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.28□□□□□ -1.72
SDC1P18827 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC1P18827 MTND4LP7-201ENST00000431728 294 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC1P18827 AL691517.1-201ENST00000440833 1235 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC1P18827 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC1P18827 AC073587.1-201ENST00000447093 876 ntBASIC4.28□□□□□ -1.72
SDC1P18827 DDX39BP2-208ENST00000453923 258 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AL133244.1-201ENST00000456007 258 ntBASIC4.28□□□□□ -1.72
SDC1P18827 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC1P18827 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC1P18827 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SDC1P18827 HMGB1P3-201ENST00000502802 616 ntBASIC4.28□□□□□ -1.72
SDC1P18827 OR7H2P-201ENST00000513483 306 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC1P18827 AC008694.2-201ENST00000517591 306 ntBASIC4.28□□□□□ -1.72
SDC1P18827 IGLV3-26-201ENST00000520756 302 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC1P18827 BRD9P1-201ENST00000529855 560 ntBASIC4.28□□□□□ -1.72
SDC1P18827 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.28□□□□□ -1.72
SDC1P18827 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC1P18827 PCNPP1-201ENST00000552501 511 ntBASIC4.28□□□□□ -1.72
SDC1P18827 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC1P18827 AC068020.1-201ENST00000594215 661 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AC084373.1-201ENST00000603311 235 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AC087283.1-201ENST00000604029 1074 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AL160290.3-201ENST00000604869 165 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AL355802.4-201ENST00000607635 548 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AC135803.1-201ENST00000608748 565 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AL445528.2-201ENST00000620582 470 ntBASIC4.28□□□□□ -1.72
SDC1P18827 MIR6719-201ENST00000622428 87 ntBASIC4.28□□□□□ -1.72
SDC1P18827 AC007546.2-201ENST00000623996 360 ntBASIC4.28□□□□□ -1.72
SDC1P18827 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.28□□□□□ -1.72
SDC1P18827 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC1P18827 AC131971.1-201ENST00000332881 1482 ntBASIC4.28□□□□□ -1.72
SDC1P18827 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC1P18827 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDC1P18827 SPATA2P1-201ENST00000431223 2055 ntBASIC4.28□□□□□ -1.72
SDC1P18827 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
SDC1P18827 HSPA8P17-201ENST00000427029 1382 ntBASIC4.27□□□□□ -1.73
SDC1P18827 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDC1P18827 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDC1P18827 AC017002.4-201ENST00000604721 1525 ntBASIC4.27□□□□□ -1.73
SDC1P18827 AC007342.7-201ENST00000624610 2337 ntBASIC4.27□□□□□ -1.73
SDC1P18827 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SDC1P18827 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDC1P18827 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SDC1P18827 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDC1P18827 RNA5SP307-201ENST00000362863 116 ntBASIC4.27□□□□□ -1.73
SDC1P18827 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SDC1P18827 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.27□□□□□ -1.73
SDC1P18827 RANP4-201ENST00000413361 655 ntBASIC4.27□□□□□ -1.73
SDC1P18827 MTATP6P19-201ENST00000413797 659 ntBASIC4.27□□□□□ -1.73
SDC1P18827 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.27□□□□□ -1.73
SDC1P18827 UBTFL3-201ENST00000418934 1024 ntBASIC4.27□□□□□ -1.73
SDC1P18827 SKP1P3-201ENST00000429280 487 ntBASIC4.27□□□□□ -1.73
SDC1P18827 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.27□□□□□ -1.73
SDC1P18827 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.27□□□□□ -1.73
SDC1P18827 VN1R54P-201ENST00000435210 1049 ntBASIC4.27□□□□□ -1.73
SDC1P18827 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 RPL23AP43-201ENST00000446445 471 ntBASIC4.27□□□□□ -1.73
SDC1P18827 AL591363.1-201ENST00000450091 483 ntBASIC4.27□□□□□ -1.73
SDC1P18827 AC012671.1-201ENST00000451912 203 ntBASIC4.27□□□□□ -1.73
SDC1P18827 PSMC1P13-201ENST00000458195 985 ntBASIC4.27□□□□□ -1.73
SDC1P18827 UBTFL6-201ENST00000477929 1024 ntBASIC4.27□□□□□ -1.73
SDC1P18827 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.27□□□□□ -1.73
SDC1P18827 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.27□□□□□ -1.73
SDC1P18827 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SDC1P18827 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.27□□□□□ -1.73
SDC1P18827 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.27□□□□□ -1.73
SDC1P18827 CD24P2-201ENST00000565486 219 ntBASIC4.27□□□□□ -1.73
SDC1P18827 RPL23AP97-201ENST00000568955 471 ntBASIC4.27□□□□□ -1.73
SDC1P18827 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.27□□□□□ -1.73
SDC1P18827 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.27□□□□□ -1.73
SDC1P18827 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.27□□□□□ -1.73
SDC1P18827 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.27□□□□□ -1.73
SDC1P18827 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.27□□□□□ -1.73
SDC1P18827 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.27□□□□□ -1.73
SDC1P18827 CR589904.2-201ENST00000612533 440 ntBASIC4.27□□□□□ -1.73
SDC1P18827 AL138721.1-201ENST00000616756 179 ntBASIC4.27□□□□□ -1.73
SDC1P18827 MIR7154-201ENST00000620673 73 ntBASIC4.27□□□□□ -1.73
SDC1P18827 OR2L1P-202ENST00000641567 1023 ntBASIC4.27□□□□□ -1.73
SDC1P18827 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDC1P18827 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SDC1P18827 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDC1P18827 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SDC1P18827 MTND4P21-201ENST00000453886 1357 ntBASIC4.27□□□□□ -1.73
SDC1P18827 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDC1P18827 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms