Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCNAP12004 OR52B1P-201ENST00000316506 909 ntBASIC4.93□□□□□ -1.62
PCNAP12004 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCNAP12004 RNA5SP183-201ENST00000362452 119 ntBASIC4.93□□□□□ -1.62
PCNAP12004 DUTP5-201ENST00000406790 469 ntBASIC4.93□□□□□ -1.62
PCNAP12004 MIR1182-201ENST00000408363 97 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.93□□□□□ -1.62
PCNAP12004 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.93□□□□□ -1.62
PCNAP12004 MTND2P2-201ENST00000434633 945 ntBASIC4.93□□□□□ -1.62
PCNAP12004 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.93□□□□□ -1.62
PCNAP12004 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.93□□□□□ -1.62
PCNAP12004 ARL5AP2-201ENST00000444698 533 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 AC092685.1-201ENST00000447960 1243 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AC016724.1-201ENST00000453215 421 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AC024558.1-201ENST00000505008 528 ntBASIC4.93□□□□□ -1.62
PCNAP12004 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCNAP12004 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.93□□□□□ -1.62
PCNAP12004 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.93□□□□□ -1.62
PCNAP12004 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCNAP12004 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.93□□□□□ -1.62
PCNAP12004 AC004825.1-201ENST00000555068 586 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AC022884.3-201ENST00000579571 248 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.93□□□□□ -1.62
PCNAP12004 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.93□□□□□ -1.62
PCNAP12004 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 LINC00901.1-201ENST00000617252 152 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AC090527.3-201ENST00000619041 548 ntBASIC4.93□□□□□ -1.62
PCNAP12004 AC022106.2-201ENST00000620114 757 ntBASIC4.93□□□□□ -1.62
PCNAP12004 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.93□□□□□ -1.62
PCNAP12004 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 AC006927.4-201ENST00000639187 543 ntBASIC4.93□□□□□ -1.62
PCNAP12004 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 AC139713.2-210ENST00000641741 992 ntBASIC4.93□□□□□ -1.62
PCNAP12004 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.93□□□□□ -1.62
PCNAP12004 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCNAP12004 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.93□□□□□ -1.62
PCNAP12004 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.93□□□□□ -1.62
PCNAP12004 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCNAP12004 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PCNAP12004 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.93□□□□□ -1.62
PCNAP12004 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCNAP12004 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCNAP12004 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCNAP12004 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCNAP12004 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCNAP12004 RNU6-543P-201ENST00000362576 108 ntBASIC4.92□□□□□ -1.62
PCNAP12004 U3.2-201ENST00000362981 210 ntBASIC4.92□□□□□ -1.62
PCNAP12004 RN7SKP113-201ENST00000363891 295 ntBASIC4.92□□□□□ -1.62
PCNAP12004 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCNAP12004 SNORA2.3-201ENST00000383920 135 ntBASIC4.92□□□□□ -1.62
PCNAP12004 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCNAP12004 RNU6-932P-201ENST00000391108 106 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AL078599.1-201ENST00000402075 293 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AL391361.1-201ENST00000405580 489 ntBASIC4.92□□□□□ -1.62
PCNAP12004 ZNF602P-201ENST00000405929 924 ntBASIC4.92□□□□□ -1.62
PCNAP12004 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.92□□□□□ -1.62
PCNAP12004 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCNAP12004 RPS3AP25-201ENST00000411660 793 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.92□□□□□ -1.62
PCNAP12004 AC079355.1-201ENST00000421770 223 ntBASIC4.92□□□□□ -1.62
PCNAP12004 OSTCP5-201ENST00000425293 453 ntBASIC4.92□□□□□ -1.62
PCNAP12004 NANOGP4-201ENST00000427230 913 ntBASIC4.92□□□□□ -1.62
PCNAP12004 OR52B5P-201ENST00000435337 951 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.92□□□□□ -1.62
PCNAP12004 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.92□□□□□ -1.62
PCNAP12004 AL357520.1-201ENST00000441557 453 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AL035551.1-201ENST00000446931 348 ntBASIC4.92□□□□□ -1.62
PCNAP12004 RPL7P61-201ENST00000451721 751 ntBASIC4.92□□□□□ -1.62
PCNAP12004 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 RNU7-27P-201ENST00000459281 62 ntBASIC4.92□□□□□ -1.62
PCNAP12004 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.92□□□□□ -1.62
PCNAP12004 RPL5P30-201ENST00000465511 891 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.92□□□□□ -1.62
PCNAP12004 RPS21P4-201ENST00000487122 248 ntBASIC4.92□□□□□ -1.62
PCNAP12004 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.92□□□□□ -1.62
PCNAP12004 PGBD4P4-201ENST00000509673 613 ntBASIC4.92□□□□□ -1.62
PCNAP12004 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PCNAP12004 AC108471.1-201ENST00000513977 287 ntBASIC4.92□□□□□ -1.62
PCNAP12004 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.92□□□□□ -1.62
PCNAP12004 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.92□□□□□ -1.62
PCNAP12004 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCNAP12004 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.92□□□□□ -1.62
PCNAP12004 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.92□□□□□ -1.62
PCNAP12004 MTCYBP23-201ENST00000558717 1102 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AC090312.1-201ENST00000580637 348 ntBASIC4.92□□□□□ -1.62
PCNAP12004 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.92□□□□□ -1.62
PCNAP12004 BNIP3P32-201ENST00000600015 554 ntBASIC4.92□□□□□ -1.62
PCNAP12004 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCNAP12004 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms