Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 Y_RNA.126-201ENST00000363382 111 ntBASIC5.18□□□□□ -1.58
RB1P06400 RNA5SP479-201ENST00000364858 117 ntBASIC5.18□□□□□ -1.58
RB1P06400 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 RNU6-225P-201ENST00000384613 103 ntBASIC5.18□□□□□ -1.58
RB1P06400 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RB1P06400 LRRC37BP1-201ENST00000398851 714 ntBASIC5.18□□□□□ -1.58
RB1P06400 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 RNU4-27P-201ENST00000410889 139 ntBASIC5.18□□□□□ -1.58
RB1P06400 SETP15-201ENST00000412724 337 ntBASIC5.18□□□□□ -1.58
RB1P06400 TBCAP2-201ENST00000416175 326 ntBASIC5.18□□□□□ -1.58
RB1P06400 GAPDHP49-201ENST00000421421 961 ntBASIC5.18□□□□□ -1.58
RB1P06400 AL606495.1-201ENST00000422100 813 ntBASIC5.18□□□□□ -1.58
RB1P06400 VN1R42P-201ENST00000424651 344 ntBASIC5.18□□□□□ -1.58
RB1P06400 AL035458.1-201ENST00000433096 585 ntBASIC5.18□□□□□ -1.58
RB1P06400 MTCO1P52-201ENST00000433928 531 ntBASIC5.18□□□□□ -1.58
RB1P06400 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 RPS27P5-201ENST00000444247 244 ntBASIC5.18□□□□□ -1.58
RB1P06400 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 RPS20P4-201ENST00000461659 355 ntBASIC5.18□□□□□ -1.58
RB1P06400 AC020898.1-201ENST00000474167 787 ntBASIC5.18□□□□□ -1.58
RB1P06400 AC005412.2-201ENST00000492004 341 ntBASIC5.18□□□□□ -1.58
RB1P06400 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.18□□□□□ -1.58
RB1P06400 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.18□□□□□ -1.58
RB1P06400 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 AC133555.2-201ENST00000550213 292 ntBASIC5.18□□□□□ -1.58
RB1P06400 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.18□□□□□ -1.58
RB1P06400 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 AL109741.3-201ENST00000561748 592 ntBASIC5.18□□□□□ -1.58
RB1P06400 SULT1C2P2-201ENST00000562517 294 ntBASIC5.18□□□□□ -1.58
RB1P06400 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.18□□□□□ -1.58
RB1P06400 AP005262.1-201ENST00000582646 997 ntBASIC5.18□□□□□ -1.58
RB1P06400 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 AL035461.2-201ENST00000619201 524 ntBASIC5.18□□□□□ -1.58
RB1P06400 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.18□□□□□ -1.58
RB1P06400 OR52H1-202ENST00000641796 1061 ntBASIC5.18□□□□□ -1.58
RB1P06400 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.18□□□□□ -1.58
RB1P06400 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.18□□□□□ -1.58
RB1P06400 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RB1P06400 AL592494.2-201ENST00000425455 1548 ntBASIC5.18□□□□□ -1.58
RB1P06400 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.17□□□□□ -1.58
RB1P06400 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RB1P06400 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.17□□□□□ -1.58
RB1P06400 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
RB1P06400 RNU6-185P-201ENST00000384421 107 ntBASIC5.17□□□□□ -1.58
RB1P06400 RNU6-796P-201ENST00000391086 107 ntBASIC5.17□□□□□ -1.58
RB1P06400 AL035079.1-201ENST00000405210 287 ntBASIC5.17□□□□□ -1.58
RB1P06400 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.17□□□□□ -1.58
RB1P06400 AC079809.1-201ENST00000415468 276 ntBASIC5.17□□□□□ -1.58
RB1P06400 AL158050.1-201ENST00000416077 457 ntBASIC5.17□□□□□ -1.58
RB1P06400 ATG4AP1-201ENST00000416893 538 ntBASIC5.17□□□□□ -1.58
RB1P06400 FABP7P1-201ENST00000424004 391 ntBASIC5.17□□□□□ -1.58
RB1P06400 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.17□□□□□ -1.58
RB1P06400 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.17□□□□□ -1.58
RB1P06400 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 MOB1AP2-201ENST00000446060 614 ntBASIC5.17□□□□□ -1.58
RB1P06400 AC069540.1-201ENST00000446320 988 ntBASIC5.17□□□□□ -1.58
RB1P06400 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.17□□□□□ -1.58
RB1P06400 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.17□□□□□ -1.58
RB1P06400 AC010618.1-201ENST00000469924 477 ntBASIC5.17□□□□□ -1.58
RB1P06400 NIP7P2-201ENST00000485801 544 ntBASIC5.17□□□□□ -1.58
RB1P06400 AC104629.1-201ENST00000494226 508 ntBASIC5.17□□□□□ -1.58
RB1P06400 AC016559.2-201ENST00000510759 359 ntBASIC5.17□□□□□ -1.58
RB1P06400 RNU2-30P-201ENST00000516209 141 ntBASIC5.17□□□□□ -1.58
RB1P06400 RNU1-6P-201ENST00000516290 144 ntBASIC5.17□□□□□ -1.58
RB1P06400 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.17□□□□□ -1.58
RB1P06400 MIR3160-1-201ENST00000577972 85 ntBASIC5.17□□□□□ -1.58
RB1P06400 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.17□□□□□ -1.58
RB1P06400 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.17□□□□□ -1.58
RB1P06400 AL121932.1-201ENST00000605542 214 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms