Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 YPEL5P3-201ENST00000547227 352 ntBASIC2.56□□□□□ -2
APOBP04114 LSM3P2-201ENST00000551246 273 ntBASIC2.56□□□□□ -2
APOBP04114 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.56□□□□□ -2
APOBP04114 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 NXPH1-205ENST00000602349 1953 ntBASIC2.56□□□□□ -2
APOBP04114 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.56□□□□□ -2
APOBP04114 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 AC017083.1-201ENST00000428093 483 ntBASIC2.56□□□□□ -2
APOBP04114 AC112206.1-201ENST00000468416 477 ntBASIC2.56□□□□□ -2
APOBP04114 BNIP3P41-201ENST00000503774 571 ntBASIC2.56□□□□□ -2
APOBP04114 AC090136.1-201ENST00000520009 240 ntBASIC2.56□□□□□ -2
APOBP04114 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.56□□□□□ -2
APOBP04114 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.56□□□□□ -2
APOBP04114 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.56□□□□□ -2
APOBP04114 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC2.56□□□□□ -2
APOBP04114 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
APOBP04114 AC021242.1-201ENST00000507315 2035 ntBASIC2.56□□□□□ -2
APOBP04114 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 HMGB3P19-201ENST00000403971 560 ntBASIC2.56□□□□□ -2
APOBP04114 TCEA1P2-201ENST00000420496 906 ntBASIC2.56□□□□□ -2
APOBP04114 RPL21P91-201ENST00000429231 479 ntBASIC2.56□□□□□ -2
APOBP04114 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.56□□□□□ -2
APOBP04114 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC2.56□□□□□ -2
APOBP04114 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.56□□□□□ -2
APOBP04114 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC2.56□□□□□ -2
APOBP04114 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.56□□□□□ -2
APOBP04114 AC006349.1-201ENST00000555526 235 ntBASIC2.56□□□□□ -2
APOBP04114 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.56□□□□□ -2
APOBP04114 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.56□□□□□ -2
APOBP04114 AC079587.1-201ENST00000603846 277 ntBASIC2.56□□□□□ -2
APOBP04114 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
APOBP04114 PRO1804-201ENST00000623780 2050 ntBASIC2.55□□□□□ -2
APOBP04114 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.55□□□□□ -2
APOBP04114 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 SNORA57.3-201ENST00000411095 141 ntBASIC2.55□□□□□ -2
APOBP04114 AL358472.1-201ENST00000431295 329 ntBASIC2.55□□□□□ -2
APOBP04114 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC2.55□□□□□ -2
APOBP04114 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC2.55□□□□□ -2
APOBP04114 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC2.55□□□□□ -2
APOBP04114 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
APOBP04114 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.55□□□□□ -2
APOBP04114 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 AC004938.1-201ENST00000438468 308 ntBASIC2.55□□□□□ -2
APOBP04114 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.55□□□□□ -2
APOBP04114 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.55□□□□□ -2
APOBP04114 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.55□□□□□ -2
APOBP04114 AC108145.1-201ENST00000503770 153 ntBASIC2.55□□□□□ -2
APOBP04114 RNA5SP497-201ENST00000516081 97 ntBASIC2.55□□□□□ -2
APOBP04114 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.55□□□□□ -2
APOBP04114 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
APOBP04114 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC2.55□□□□□ -2
APOBP04114 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.55□□□□□ -2
APOBP04114 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.55□□□□□ -2
APOBP04114 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
APOBP04114 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC2.55□□□□□ -2
APOBP04114 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 RN7SL601P-201ENST00000471221 293 ntBASIC2.55□□□□□ -2
APOBP04114 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.55□□□□□ -2
APOBP04114 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC2.55□□□□□ -2
APOBP04114 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.55□□□□□ -2
APOBP04114 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC2.55□□□□□ -2
APOBP04114 AL031658.2-201ENST00000616850 651 ntBASIC2.55□□□□□ -2
APOBP04114 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.55□□□□□ -2
APOBP04114 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.55□□□□□ -2
APOBP04114 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms