Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL133406.3-201ENST00000606817 541 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN9O95484 AC019080.5-201ENST00000624891 757 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 LINC01808-202ENST00000641680 1116 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN9O95484 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN9O95484 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN9O95484 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN9O95484 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN9O95484 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN9O95484 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLDN9O95484 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLDN9O95484 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN9O95484 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN9O95484 RNA5SP87-201ENST00000384155 118 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC093719.1-202ENST00000392735 373 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AL078604.1-201ENST00000404609 466 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLDN9O95484 DHFRP5-201ENST00000406944 564 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 RPA2P2-201ENST00000419698 796 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN9O95484 CDY14P-201ENST00000431260 1014 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 CDY12P-201ENST00000440679 1015 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 CDY13P-201ENST00000445813 1015 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 PTMAP3-201ENST00000447474 330 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 CDY23P-201ENST00000451661 1014 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN9O95484 AL354710.1-201ENST00000453641 246 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 RPL7AP52-201ENST00000458096 790 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 PSMC1P13-201ENST00000458195 985 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC006967.1-201ENST00000467608 589 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN9O95484 AC008897.1-201ENST00000494006 347 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 OR52A4P-203ENST00000498233 1014 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC105233.1-201ENST00000498840 781 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 ARL4AP1-201ENST00000503220 705 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.35□□□□□ -1.71
CLDN9O95484 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 AC022882.1-201ENST00000532142 501 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN9O95484 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN9O95484 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CLDN9O95484 AC233280.2-201ENST00000603917 1070 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC010201.1-201ENST00000605051 540 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 BNIP3P7-201ENST00000605641 516 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC012557.1-201ENST00000607115 611 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 AC091979.2-201ENST00000607514 214 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN9O95484 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN9O95484 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN9O95484 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN9O95484 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CLDN9O95484 AC005332.5-201ENST00000591222 2919 ntBASIC4.35□□□□□ -1.71
CLDN9O95484 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CLDN9O95484 AC107027.3-201ENST00000565095 3473 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CLDN9O95484 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLDN9O95484 RNA5SP397-201ENST00000391323 118 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 RN7SKP222-201ENST00000410651 315 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 RN7SKP106-201ENST00000410832 272 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 UBTFL3-201ENST00000418934 1024 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN9O95484 AL360081.1-201ENST00000428299 555 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 VDAC1P6-201ENST00000430062 855 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN9O95484 AL049745.1-201ENST00000433953 286 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN9O95484 DDX39BP2-208ENST00000453923 258 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN9O95484 AC022795.1-201ENST00000473808 480 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 UBTFL6-201ENST00000477929 1024 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.34□□□□□ -1.71
CLDN9O95484 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN9O95484 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 RNA5SP497-201ENST00000516081 97 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 RNU6-551P-201ENST00000516661 103 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 MTCYBP19-201ENST00000517463 1124 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 AC104997.1-201ENST00000519761 717 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN9O95484 AC100770.1-201ENST00000532310 322 ntBASIC4.34□□□□□ -1.71
CLDN9O95484 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN9O95484 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms