Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
SEMA3DO95025 AC139769.1-204ENST00000472297 1931 ntBASIC4.32□□□□□ -1.72
SEMA3DO95025 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA3DO95025 AL592437.2-201ENST00000421655 2434 ntBASIC4.32□□□□□ -1.72
SEMA3DO95025 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA3DO95025 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.31□□□□□ -1.72
SEMA3DO95025 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
SEMA3DO95025 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.31□□□□□ -1.72
SEMA3DO95025 OR11H5P-202ENST00000641612 1325 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SEMA3DO95025 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 RNU1-63P-201ENST00000383902 164 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AL049697.2-201ENST00000403708 294 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.31□□□□□ -1.72
SEMA3DO95025 UBTFL3-201ENST00000418934 1024 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 NFYAP1-201ENST00000431953 972 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.31□□□□□ -1.72
SEMA3DO95025 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.31□□□□□ -1.72
SEMA3DO95025 AL035551.1-201ENST00000446931 348 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AC092905.1-201ENST00000467527 949 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.31□□□□□ -1.72
SEMA3DO95025 UBTFL6-201ENST00000477929 1024 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AC012158.1-204ENST00000483430 465 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
SEMA3DO95025 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.31□□□□□ -1.72
SEMA3DO95025 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.31□□□□□ -1.72
SEMA3DO95025 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.31□□□□□ -1.72
SEMA3DO95025 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.31□□□□□ -1.72
SEMA3DO95025 AC051619.2-201ENST00000559063 397 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AC090515.3-201ENST00000560431 315 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.31□□□□□ -1.72
SEMA3DO95025 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.31□□□□□ -1.72
SEMA3DO95025 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.31□□□□□ -1.72
SEMA3DO95025 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA3DO95025 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.31□□□□□ -1.72
SEMA3DO95025 AC090181.2-201ENST00000602975 672 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 OR6R2P-201ENST00000609216 300 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AC096586.2-201ENST00000610260 441 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AL353726.1-201ENST00000614041 1000 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 MIR6780A-201ENST00000615089 68 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AL669942.2-201ENST00000620352 697 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 AC067852.7-201ENST00000623270 535 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.31□□□□□ -1.72
SEMA3DO95025 AC022893.2-201ENST00000564832 3296 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.31□□□□□ -1.72
SEMA3DO95025 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.31□□□□□ -1.72
SEMA3DO95025 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.3□□□□□ -1.72
SEMA3DO95025 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.3□□□□□ -1.72
SEMA3DO95025 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
SEMA3DO95025 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEMA3DO95025 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEMA3DO95025 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SEMA3DO95025 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SEMA3DO95025 SNORD113.2-201ENST00000364166 89 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 SNORA70F-201ENST00000384142 135 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 RNU1-44P-201ENST00000384453 163 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AL035419.1-201ENST00000397037 564 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 RN7SKP106-201ENST00000410832 272 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 SNORA74C-2-201ENST00000411179 201 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.3□□□□□ -1.72
SEMA3DO95025 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.3□□□□□ -1.72
SEMA3DO95025 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.3□□□□□ -1.72
SEMA3DO95025 TRGV7-201ENST00000427089 353 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 BRWD1P3-201ENST00000428816 390 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.3□□□□□ -1.72
SEMA3DO95025 AL049745.1-201ENST00000433953 286 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEMA3DO95025 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.3□□□□□ -1.72
SEMA3DO95025 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.3□□□□□ -1.72
SEMA3DO95025 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEMA3DO95025 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEMA3DO95025 AL121877.1-201ENST00000453704 622 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AL513533.1-201ENST00000453728 415 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.3□□□□□ -1.72
SEMA3DO95025 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.3□□□□□ -1.72
SEMA3DO95025 RPL12P20-201ENST00000475538 479 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC008897.1-201ENST00000494006 347 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AP001960.1-201ENST00000506494 658 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 MTND6P33-201ENST00000571794 183 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC115989.2-201ENST00000578640 563 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 MIR4480-201ENST00000582492 71 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 VN1R81P-201ENST00000602085 372 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC103792.1-201ENST00000603591 919 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC010201.1-201ENST00000605051 540 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC026368.1-201ENST00000614934 690 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AL121873.1-201ENST00000616013 524 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.3□□□□□ -1.72
SEMA3DO95025 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.3□□□□□ -1.72
SEMA3DO95025 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.3□□□□□ -1.72
SEMA3DO95025 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.3□□□□□ -1.72
SEMA3DO95025 NXPH1-205ENST00000602349 1953 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms