Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 RPL27AP5-201ENST00000469428 449 ntBASIC1.86□□□□□ -2.11
USH2AO75445 RN7SL271P-201ENST00000487601 295 ntBASIC1.86□□□□□ -2.11
USH2AO75445 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 OR7E13P-201ENST00000526052 910 ntBASIC1.86□□□□□ -2.11
USH2AO75445 ATP5F1P5-201ENST00000526403 760 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC091544.4-201ENST00000555268 342 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC034105.3-201ENST00000565294 442 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC022884.2-201ENST00000578535 580 ntBASIC1.86□□□□□ -2.11
USH2AO75445 RNU1-30P-201ENST00000606575 163 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC009159.1-201ENST00000618386 642 ntBASIC1.86□□□□□ -2.11
USH2AO75445 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
USH2AO75445 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 NBPF8-201ENST00000583271 5330 ntBASIC1.86□□□□□ -2.11
USH2AO75445 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 AL035079.1-201ENST00000405210 287 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC1.86□□□□□ -2.11
USH2AO75445 AC010285.3-201ENST00000511668 676 ntBASIC1.86□□□□□ -2.11
USH2AO75445 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 AC093591.2-201ENST00000565254 3843 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC1.86□□□□□ -2.11
USH2AO75445 MIR7843-201ENST00000622274 79 ntBASIC1.86□□□□□ -2.11
USH2AO75445 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
USH2AO75445 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
USH2AO75445 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
USH2AO75445 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
USH2AO75445 NACAP7-201ENST00000407371 609 ntBASIC1.85□□□□□ -2.11
USH2AO75445 RPL21P43-201ENST00000425440 472 ntBASIC1.85□□□□□ -2.11
USH2AO75445 FDX1P2-201ENST00000450769 375 ntBASIC1.85□□□□□ -2.11
USH2AO75445 RPS27AP17-201ENST00000463344 455 ntBASIC1.85□□□□□ -2.11
USH2AO75445 TMED11P-201ENST00000479478 690 ntBASIC1.85□□□□□ -2.11
USH2AO75445 RN7SL809P-201ENST00000482040 297 ntBASIC1.85□□□□□ -2.11
USH2AO75445 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.85□□□□□ -2.11
USH2AO75445 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC1.85□□□□□ -2.11
USH2AO75445 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 AL157394.1-201ENST00000562983 1224 ntBASIC1.85□□□□□ -2.11
USH2AO75445 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.85□□□□□ -2.11
USH2AO75445 AC073530.2-201ENST00000623987 261 ntBASIC1.85□□□□□ -2.11
USH2AO75445 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 AC092681.1-201ENST00000297369 291 ntBASIC1.85□□□□□ -2.11
USH2AO75445 RNA5SP120-201ENST00000410900 112 ntBASIC1.85□□□□□ -2.11
USH2AO75445 CYCSP53-201ENST00000455540 265 ntBASIC1.85□□□□□ -2.11
USH2AO75445 RPS20P4-201ENST00000461659 355 ntBASIC1.85□□□□□ -2.11
USH2AO75445 AC012158.1-204ENST00000483430 465 ntBASIC1.85□□□□□ -2.11
USH2AO75445 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC1.85□□□□□ -2.11
USH2AO75445 AC007546.2-201ENST00000623996 360 ntBASIC1.85□□□□□ -2.11
USH2AO75445 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 AP000473.2-201ENST00000602659 1537 ntBASIC1.85□□□□□ -2.11
USH2AO75445 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 AL390879.1-201ENST00000439143 386 ntBASIC1.85□□□□□ -2.11
USH2AO75445 AC106707.2-201ENST00000484182 374 ntBASIC1.85□□□□□ -2.11
USH2AO75445 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC1.85□□□□□ -2.11
USH2AO75445 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC1.85□□□□□ -2.11
USH2AO75445 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC1.85□□□□□ -2.11
USH2AO75445 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 SCARNA15-201ENST00000607520 4325 ntBASIC1.85□□□□□ -2.11
USH2AO75445 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC1.85□□□□□ -2.11
USH2AO75445 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH2AO75445 AP001284.1-201ENST00000528393 2118 ntBASIC1.85□□□□□ -2.11
USH2AO75445 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC1.85□□□□□ -2.11
USH2AO75445 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms