Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 AC104982.1-201ENST00000478775 574 ntBASIC4.59□□□□□ -1.67
SSX4O60224 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX4O60224 SNRPCP2-201ENST00000504370 475 ntBASIC4.59□□□□□ -1.67
SSX4O60224 SUMO2P5-201ENST00000506790 245 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 HMGB1P44-201ENST00000508597 572 ntBASIC4.59□□□□□ -1.67
SSX4O60224 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX4O60224 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 SCARNA1-201ENST00000517138 166 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC105031.1-201ENST00000518550 476 ntBASIC4.59□□□□□ -1.67
SSX4O60224 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 AL137100.1-201ENST00000556703 1620 ntBASIC4.59□□□□□ -1.67
SSX4O60224 RPL10P14-201ENST00000565265 298 ntBASIC4.59□□□□□ -1.67
SSX4O60224 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX4O60224 MIR4436B2-201ENST00000581415 91 ntBASIC4.59□□□□□ -1.67
SSX4O60224 MIR4436B1-201ENST00000583272 91 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC006116.3-201ENST00000592968 361 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 BNIP3P40-201ENST00000596017 556 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX4O60224 AC023762.1-201ENST00000603280 584 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 MIR6748-201ENST00000610433 71 ntBASIC4.59□□□□□ -1.67
SSX4O60224 RNU6-1192P-201ENST00000612197 107 ntBASIC4.59□□□□□ -1.67
SSX4O60224 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 MIR8069-1-201ENST00000616627 86 ntBASIC4.59□□□□□ -1.67
SSX4O60224 RNU6-489P-201ENST00000618289 107 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC139769.3-201ENST00000618383 175 ntBASIC4.59□□□□□ -1.67
SSX4O60224 MIR8069-2-201ENST00000621412 86 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AP002799.1-201ENST00000623552 423 ntBASIC4.59□□□□□ -1.67
SSX4O60224 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 AC013437.2-201ENST00000639587 677 ntBASIC4.59□□□□□ -1.67
SSX4O60224 CASC19-221ENST00000641309 1382 ntBASIC4.59□□□□□ -1.67
SSX4O60224 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX4O60224 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SSX4O60224 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSX4O60224 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
SSX4O60224 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.59□□□□□ -1.68
SSX4O60224 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX4O60224 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX4O60224 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SSX4O60224 HSPA8P18-201ENST00000439846 1928 ntBASIC4.58□□□□□ -1.68
SSX4O60224 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSX4O60224 ENSAP3-201ENST00000312710 333 ntBASIC4.58□□□□□ -1.68
SSX4O60224 RNA5SP305-201ENST00000362665 119 ntBASIC4.58□□□□□ -1.68
SSX4O60224 RNA5SP443-201ENST00000363083 132 ntBASIC4.58□□□□□ -1.68
SSX4O60224 RNU6-304P-201ENST00000364855 107 ntBASIC4.58□□□□□ -1.68
SSX4O60224 RNU1-74P-201ENST00000384108 171 ntBASIC4.58□□□□□ -1.68
SSX4O60224 U6.112-201ENST00000384129 70 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AL035419.1-201ENST00000397037 564 ntBASIC4.58□□□□□ -1.68
SSX4O60224 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 HSPA8P15-201ENST00000401676 786 ntBASIC4.58□□□□□ -1.68
SSX4O60224 RN7SKP216-201ENST00000411050 312 ntBASIC4.58□□□□□ -1.68
SSX4O60224 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX4O60224 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX4O60224 TCEA1P2-201ENST00000420496 906 ntBASIC4.58□□□□□ -1.68
SSX4O60224 PTP4A1P7-201ENST00000423476 514 ntBASIC4.58□□□□□ -1.68
SSX4O60224 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX4O60224 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX4O60224 AC093655.2-201ENST00000425735 631 ntBASIC4.58□□□□□ -1.68
SSX4O60224 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.58□□□□□ -1.68
SSX4O60224 VN1R54P-201ENST00000435210 1049 ntBASIC4.58□□□□□ -1.68
SSX4O60224 CBX1P4-201ENST00000439415 457 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX4O60224 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 Z95152.1-201ENST00000453556 656 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AL354710.1-201ENST00000453641 246 ntBASIC4.58□□□□□ -1.68
SSX4O60224 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX4O60224 RPL35AP28-201ENST00000459730 331 ntBASIC4.58□□□□□ -1.68
SSX4O60224 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SSX4O60224 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX4O60224 AC008427.1-201ENST00000503102 655 ntBASIC4.58□□□□□ -1.68
SSX4O60224 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX4O60224 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 AC083923.1-201ENST00000523708 376 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 AP000676.2-201ENST00000529711 301 ntBASIC4.58□□□□□ -1.68
SSX4O60224 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX4O60224 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX4O60224 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX4O60224 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX4O60224 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX4O60224 ATP5F1P7-201ENST00000567330 760 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AC005341.1-201ENST00000571086 708 ntBASIC4.58□□□□□ -1.68
SSX4O60224 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX4O60224 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX4O60224 AC125494.3-201ENST00000602759 455 ntBASIC4.58□□□□□ -1.68
SSX4O60224 TAS2R6P-201ENST00000605022 826 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AC133644.2-201ENST00000608142 540 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AC016597.2-201ENST00000613256 341 ntBASIC4.58□□□□□ -1.68
SSX4O60224 STMN1P1-201ENST00000617809 440 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AC022960.3-201ENST00000619794 441 ntBASIC4.58□□□□□ -1.68
SSX4O60224 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms