Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ACTR3P2-201ENST00000439585 1257 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 HMGB3P9-201ENST00000441799 583 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL591363.1-201ENST00000450091 483 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 NUTF2P7-201ENST00000453086 375 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC135999.1-201ENST00000478962 479 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL669942.2-201ENST00000620352 697 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 MIR7154-201ENST00000620673 73 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 OR52H1-202ENST00000641796 1061 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.7
TMX2-CTNND1H3BSU7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.4□□□□□ -1.7
TMX2-CTNND1H3BSU7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.4□□□□□ -1.7
TMX2-CTNND1H3BSU7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.4□□□□□ -1.7
TMX2-CTNND1H3BSU7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.4□□□□□ -1.7
TMX2-CTNND1H3BSU7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 FAM3C2-201ENST00000312214 681 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPS26P8-201ENST00000393490 348 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL691447.1-201ENST00000419456 387 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 PPIAP13-201ENST00000434706 478 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL450263.2-201ENST00000439400 589 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPL5P30-201ENST00000465511 891 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC105129.1-201ENST00000560250 297 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC074050.1-201ENST00000563247 211 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 COX6CP4-201ENST00000605798 228 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AP003072.5-201ENST00000623872 773 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL359922.3-201ENST00000624779 1670 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AP001002.1-201ENST00000625148 1513 ntBASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.4□□□□□ -1.71
TMX2-CTNND1H3BSU7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC007390.2-201ENST00000606229 3803 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC021146.4-201ENST00000309229 279 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 SNORA68.2-201ENST00000391263 128 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL356968.2-201ENST00000412769 1257 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPL7AP25-201ENST00000423357 805 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 MRPL48P1-201ENST00000445390 636 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPL7P32-201ENST00000457119 744 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPL21P126-201ENST00000470049 478 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 MTCO3P42-201ENST00000509488 518 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 MTCO3P39-201ENST00000514812 518 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPS27AP18-201ENST00000515536 459 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 PSMB7P1-201ENST00000556349 514 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC021483.2-201ENST00000567415 758 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC093227.2-201ENST00000589357 285 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC130352.1-201ENST00000602979 661 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL139395.1-201ENST00000603662 160 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL161912.3-201ENST00000605404 628 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC114781.5-201ENST00000615297 108 ntBASIC4.39□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC131238.1-201ENST00000617135 328 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms