Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TBC1D3FA6NER0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 IGKV7-3-201ENST00000357453 298 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 RNA5SP443-201ENST00000363083 132 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 RNU4-51P-201ENST00000364206 140 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 RNU6-549P-201ENST00000384433 107 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 SNORA66-201ENST00000384792 133 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 MIR513B-201ENST00000385136 84 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 MIR589-201ENST00000385238 99 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 Z97832.1-201ENST00000402490 328 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC092745.2-202ENST00000411880 369 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 GNG5P5-201ENST00000420444 220 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 CDY14P-201ENST00000431260 1014 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 CDY12P-201ENST00000440679 1015 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 RPS26P30-201ENST00000443431 335 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 MTCYBP42-201ENST00000444653 1130 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 CDY13P-201ENST00000445813 1015 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 CDY23P-201ENST00000451661 1014 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 RPL7AP52-201ENST00000458096 790 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 RPS24P16-201ENST00000497294 392 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC140172.1-201ENST00000502928 141 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC091860.1-201ENST00000505723 432 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 COX6B1P5-201ENST00000509843 249 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 POLR2KP1-201ENST00000553226 168 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AL358913.1-201ENST00000554342 121 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 MTND3P12-201ENST00000559068 328 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC104785.1-201ENST00000603220 588 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC113368.1-201ENST00000603736 382 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AL035411.2-201ENST00000604022 421 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AL355493.4-201ENST00000618530 292 ntBASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.13□□□□□ -1.59
TBC1D3FA6NER0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 RNU4-68P-201ENST00000364314 141 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 SNORA5.1-201ENST00000384275 131 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 RNU6-1242P-201ENST00000391052 103 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 GPS2P1-201ENST00000411761 986 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 COX6B1P1-201ENST00000415962 213 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 CHEK2P3-201ENST00000416118 248 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 RPS3AP37-201ENST00000419176 745 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 KRR1P1-201ENST00000419430 803 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 AC099063.2-201ENST00000446360 662 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 NOP56P2-201ENST00000447491 769 ntBASIC5.12□□□□□ -1.59
TBC1D3FA6NER0 AC004022.1-201ENST00000447766 1066 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms