Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 OR2AF1P-201ENST00000454899 889 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 RPS3AP22-201ENST00000488297 769 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 RN7SL244P-201ENST00000493405 297 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC091435.1-201ENST00000505442 584 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 SETP1-201ENST00000556014 845 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC019131.2-201ENST00000609071 870 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AL022401.1-201ENST00000619498 108 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 AC025574.1-201ENST00000554784 1653 ntBASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV5S1A1TA0A578 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC017007.4-201ENST00000503353 1352 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 DHX9P1-201ENST00000436565 3076 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC008549.2-201ENST00000333482 706 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AL034403.1-201ENST00000399414 885 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 PEX12P1-201ENST00000400284 1048 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 SFR1P1-201ENST00000403720 688 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 MIR1302-8-201ENST00000408342 128 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 MIR1178-201ENST00000408396 91 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 TRGV6-201ENST00000417928 299 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC093414.1-201ENST00000434712 514 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 NANOGP2-201ENST00000435391 727 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 UBE2D3P1-201ENST00000436669 444 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AL008629.1-201ENST00000438615 184 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 EXTL2P1-201ENST00000446218 416 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC092685.1-201ENST00000447960 1243 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC091951.3-201ENST00000504093 246 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC119751.1-201ENST00000513357 765 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC090819.1-201ENST00000523800 1111 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 HAUS8P1-201ENST00000549005 542 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC090695.1-201ENST00000561269 1222 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 RN7SL753P-201ENST00000581238 290 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AL020997.3-201ENST00000602843 359 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC087783.2-201ENST00000605070 562 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AL133507.1-201ENST00000605269 557 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC016877.3-201ENST00000606778 504 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC012557.1-201ENST00000607115 611 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AL445423.1-201ENST00000609941 536 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 OR1S1-201ENST00000624470 978 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 OR8B1P-202ENST00000641132 1178 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AC008758.3-201ENST00000507003 1829 ntBASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV5S1A1TA0A578 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms