Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 CASC19-206ENST00000641028 1430 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 ENSAP3-201ENST00000312710 333 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 RNA5SP455-201ENST00000365190 119 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 MIR513B-201ENST00000385136 84 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AL592291.1-201ENST00000403830 352 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AL391361.1-201ENST00000405580 489 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 MIR1271-201ENST00000408537 86 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 RN7SKP222-201ENST00000410651 315 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AF186996.5-201ENST00000418098 904 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 KRR1P1-201ENST00000419430 803 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC246680.2-201ENST00000422106 389 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 OR7E125P-201ENST00000443450 846 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 Z77249.1-201ENST00000444622 1175 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 PTGES3P5-201ENST00000455109 434 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC090114.3-201ENST00000479267 829 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC020890.1-201ENST00000491837 504 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC023050.1-201ENST00000498198 304 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 COX6B1P5-201ENST00000509843 249 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 ATP5LP3-201ENST00000514223 304 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 RNU6-513P-201ENST00000516104 104 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 NMNAT1P1-201ENST00000554095 876 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 OR4U1P-201ENST00000554958 912 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 NIFKP6-201ENST00000598115 845 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC125494.3-201ENST00000602759 455 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 GAS5-AS1-201ENST00000602767 694 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC010975.3-201ENST00000618727 978 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AP002791.1-201ENST00000623291 381 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 MTND4P8-201ENST00000514997 1362 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AP001642.1-201ENST00000624727 2117 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 DDX18P5-201ENST00000534547 1306 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC126323.6-202ENST00000568092 3511 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AL603750.1-201ENST00000624216 1717 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 RNU4-68P-201ENST00000364314 141 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 OOSP1-201ENST00000398992 1270 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AL136310.1-201ENST00000404926 654 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MIR1286-201ENST00000408112 78 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 U3.36-201ENST00000408418 213 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC107081.1-201ENST00000414975 361 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 TBCAP2-201ENST00000416175 326 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 E2F6P2-201ENST00000420708 748 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 OR2X1P-201ENST00000421144 687 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AL513175.2-201ENST00000422071 443 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 DDX39BP1-205ENST00000422507 192 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC092162.1-201ENST00000432828 434 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC084290.1-201ENST00000434995 374 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MTCYBP31-201ENST00000438855 1122 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 ARL5AP2-201ENST00000444698 533 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AL589880.1-201ENST00000448271 287 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms