Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPL23AP38-201ENST00000423801 469 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 RPL7P19-201ENST00000469948 618 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP519-201ENST00000516480 119 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 CYCSP28-201ENST00000534284 321 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AL352979.3-201ENST00000553515 247 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AL109766.1-201ENST00000555080 552 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 TVP23BP1-201ENST00000557500 617 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 SS18L2P2-201ENST00000583960 235 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AL161729.3-201ENST00000603533 673 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 QTRT1P1-201ENST00000604344 1078 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AC092653.1-201ENST00000608509 531 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AL451049.1-201ENST00000608672 497 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AC022106.2-201ENST00000620114 757 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AC068724.3-201ENST00000625906 87 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 TMEM30CP-203ENST00000637814 1035 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 MIR1271-201ENST00000408537 86 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 GTF2IP2-201ENST00000424290 697 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 RPS27AP12-201ENST00000429552 465 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 RPL23AP81-201ENST00000455252 467 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 RPL23AP65-201ENST00000475608 468 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AL161747.1-201ENST00000480068 358 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AL592156.1-201ENST00000508758 304 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 KCTD9P2-201ENST00000512203 1013 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 RNU6-751P-201ENST00000516382 101 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 RNU6-551P-201ENST00000516661 103 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP73-201ENST00000516744 108 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AC022784.5-201ENST00000522241 437 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 EIF1AXP2-201ENST00000555940 413 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AC023043.4-201ENST00000612081 449 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 FAM27D1-201ENST00000612308 341 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 AL391597.1-201ENST00000618707 694 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 MIR8059-201ENST00000620427 81 ntBASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMIM28A0A1B0GU29 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 MFSD8-220ENST00000641243 1422 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 Y_RNA.62-201ENST00000362840 99 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 RN7SKP227-201ENST00000364445 330 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 RPS26P8-201ENST00000393490 348 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 RPS27AP11-201ENST00000402798 447 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 MIR1911-201ENST00000410783 80 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 PTP4A1P1-201ENST00000420539 515 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC007064.3-201ENST00000422608 359 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 EIF1P3-201ENST00000423841 334 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 BTF3P10-201ENST00000433415 495 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 ARAFP2-201ENST00000440565 559 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AL672167.3-201ENST00000465951 960 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 STRADBP1-201ENST00000478954 1281 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 MTCO1P35-201ENST00000515270 228 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC090151.1-201ENST00000520784 730 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC007224.1-201ENST00000564410 144 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 MIR3936-201ENST00000584304 110 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC005034.4-201ENST00000603612 899 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms