Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC053481.2-202ENST00000582394 1500 ntBASIC4.4□□□□□ -1.71
TRBV5-4A0A0C4DH59 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRBV5-4A0A0C4DH59 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.4□□□□□ -1.71
TRBV5-4A0A0C4DH59 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
TRBV5-4A0A0C4DH59 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.4□□□□□ -1.71
TRBV5-4A0A0C4DH59 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRBV5-4A0A0C4DH59 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 RNA5SP22-201ENST00000365393 109 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 TMSB10P2-201ENST00000416049 131 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 HMGB3P10-201ENST00000434734 572 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AL513321.1-201ENST00000441175 761 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPS27AP15-201ENST00000447672 466 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC069277.2-201ENST00000454211 432 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPS27AP17-201ENST00000463344 455 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPL7AP10-201ENST00000481016 791 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 OR4R2P-201ENST00000530815 597 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC125612.1-201ENST00000547580 377 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 GSTP1P1-201ENST00000548078 319 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC068831.4-201ENST00000556118 109 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC008759.1-201ENST00000589783 983 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 SNX6P1-201ENST00000601728 1224 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 MTCO3P22-201ENST00000603219 784 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC093765.1-201ENST00000603758 881 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 KATNBL1P5-201ENST00000605015 517 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC005014.3-201ENST00000605985 190 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AL133445.2-201ENST00000611191 527 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 uc_338.18-201ENST00000615451 175 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AP003400.6-201ENST00000624698 740 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC120338.1-201ENST00000625074 1541 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 AL137100.1-201ENST00000556703 1620 ntBASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRBV5-4A0A0C4DH59 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 SPATA2P1-201ENST00000431223 2055 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC008033.1-201ENST00000216407 1162 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 RNA5SP372-201ENST00000390836 115 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 ELOCP19-201ENST00000411919 318 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPL26P29-201ENST00000415623 438 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPEP2-201ENST00000432149 701 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 FTH1P16-201ENST00000435241 552 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPL7P33-201ENST00000444159 742 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 RPL21P126-201ENST00000470049 478 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC093720.1-201ENST00000505681 714 ntBASIC4.38□□□□□ -1.71
TRBV5-4A0A0C4DH59 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms