Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC002524.1-201ENST00000411687 547 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 MTND4P22-201ENST00000413116 1169 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 Z75741.2-201ENST00000417272 1167 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC068135.1-201ENST00000446164 246 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 NPM1P39-201ENST00000449818 867 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC093890.1-201ENST00000502554 540 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 GTF2F2P1-201ENST00000511083 675 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC004980.4-201ENST00000513375 203 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 snoU109.6-201ENST00000516831 118 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 snoZ278.1-201ENST00000517059 112 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 IGKV2D-10-201ENST00000520194 281 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AP004607.2-201ENST00000533949 322 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 POLR2KP1-201ENST00000553226 168 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 NPM1P42-201ENST00000560329 862 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC023813.2-201ENST00000564321 469 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 MTCO1P40-201ENST00000574371 625 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC022884.3-201ENST00000579571 248 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC069366.1-201ENST00000583159 838 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC016877.3-201ENST00000606778 504 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC091304.6-201ENST00000619761 202 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC091953.3-201ENST00000623220 236 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 KYNUP3-201ENST00000574386 1341 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 TCP11X1-202ENST00000622971 1372 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 OR4F13P-202ENST00000560066 2054 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 ZNF876P-202ENST00000398732 1485 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC100871.1-201ENST00000507871 1456 ntBASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC187A0A096LP49 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC008549.2-201ENST00000333482 706 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 SNORA56-201ENST00000383966 129 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 LRRC37BP1-201ENST00000398851 714 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RPSAP35-201ENST00000413753 818 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RIMKLBP2-201ENST00000424737 654 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AL049745.1-201ENST00000433953 286 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 IGBP1P3-201ENST00000447449 1000 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RPL7AP52-201ENST00000458096 790 ntBASIC5.11□□□□□ -1.59
CCDC187A0A096LP49 RPS3AP41-201ENST00000462701 778 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms