Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL353662.3-201ENST00000625131 237 ntBASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 MIR4278-201ENST00000636094 69 ntBASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 AC087565.3-203ENST00000641018 837 ntBASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC01558Q9Y6Z2 UBE3AP2-201ENST00000429033 2259 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC114786.1-201ENST00000512892 1415 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 RNFT1P3-201ENST00000340898 1052 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 SNORA64.3-201ENST00000365647 134 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AMMECR1LP1-201ENST00000415152 841 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 RPL12P43-201ENST00000420608 499 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 NPM1P34-201ENST00000428821 893 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AP006193.1-201ENST00000440724 485 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC019185.1-201ENST00000442718 389 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC125238.1-201ENST00000448842 249 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC010733.1-201ENST00000451515 401 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC005229.2-201ENST00000456995 399 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 RPS23P6-201ENST00000466136 431 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC010683.1-201ENST00000473673 378 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 FTH1P24-201ENST00000503502 462 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 NMNAT1P1-201ENST00000554095 876 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC005479.1-201ENST00000554629 451 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 MIR4738-201ENST00000579134 87 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 PSMA6P4-201ENST00000603247 718 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC024085.1-201ENST00000604299 432 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC073137.1-201ENST00000605636 634 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 OR7A19P-201ENST00000608051 733 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC108673.3-201ENST00000609183 335 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 CXADRP3-202ENST00000617265 1100 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 PLCE1P1-201ENST00000622094 305 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 CUL4AP1-201ENST00000514750 1863 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC015813.6-201ENST00000624409 5808 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC017002.4-201ENST00000604721 1525 ntBASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01558Q9Y6Z2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC058791.1-201ENST00000608412 3198 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 OR4A15-201ENST00000314706 1035 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RNU6-304P-201ENST00000364855 107 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RNA5SP85-201ENST00000365378 119 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms