Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 RNU6-304P-201ENST00000364855 107 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AP000580.1-201ENST00000404439 358 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 MIR1271-201ENST00000408537 86 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 RN7SKP100-201ENST00000411258 284 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 OR51B3P-201ENST00000412287 913 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC092013.1-201ENST00000438795 332 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 ELOCP10-201ENST00000440624 327 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 RNU6-1218P-201ENST00000458990 108 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 RNU7-27P-201ENST00000459281 62 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC022795.1-201ENST00000473808 480 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 METTL15P1-201ENST00000481421 1045 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 RN7SKP276-201ENST00000516242 268 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC091042.1-201ENST00000579213 173 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC040174.2-201ENST00000602701 465 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AL512782.1-201ENST00000603093 364 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC123786.2-201ENST00000603459 275 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 ELOCP34-201ENST00000604436 327 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AL391358.1-201ENST00000605342 190 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AL356490.1-201ENST00000623079 479 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 MTND4P21-201ENST00000453886 1357 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ATG4BQ9Y4P1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATG4BQ9Y4P1 AC093311.1-201ENST00000506586 2021 ntBASIC4.46□□□□□ -1.69
ATG4BQ9Y4P1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.46□□□□□ -1.69
ATG4BQ9Y4P1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATG4BQ9Y4P1 MAPK10-263ENST00000641052 4307 ntBASIC4.46□□□□□ -1.69
ATG4BQ9Y4P1 AL136164.3-201ENST00000624429 3978 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC093719.1-202ENST00000392735 373 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AL080315.1-201ENST00000406055 466 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 RN7SKP247-201ENST00000411094 308 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 MTND4P24-201ENST00000424002 397 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AL353597.2-202ENST00000434901 373 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC005154.2-201ENST00000438110 379 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 XKRY2-201ENST00000442362 1093 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 TDGF1P1-201ENST00000445734 527 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC093663.2-201ENST00000484625 313 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 SOX5P1-201ENST00000524155 1127 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 CKS1BP1-201ENST00000555221 240 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 OR4H6P-202ENST00000603819 340 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC010200.2-201ENST00000605098 235 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC073137.1-201ENST00000605636 634 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC012557.1-201ENST00000607115 611 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AC011815.3-201ENST00000624194 473 ntBASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4BQ9Y4P1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms