Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SIX4Q9UIU6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 AC135352.1-201ENST00000506173 1418 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL132640.2-201ENST00000559968 1698 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5□□□□□ -1.61
SIX4Q9UIU6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 RNA5SP397-201ENST00000391323 118 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL592291.1-201ENST00000403830 352 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 CTSL3P-202ENST00000412179 788 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL158050.1-201ENST00000416077 457 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC069213.2-201ENST00000420238 366 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 MRPL48P1-201ENST00000445390 636 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC104651.2-201ENST00000447549 528 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AL627224.1-201ENST00000448334 444 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5□□□□□ -1.61
SIX4Q9UIU6 OFD1P3Y-201ENST00000453312 783 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 OR11I1P-201ENST00000486033 954 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC021087.2-201ENST00000504656 1203 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AC234771.5-201ENST00000600161 514 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AL121652.1-201ENST00000608851 448 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AP000346.3-201ENST00000622821 210 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC006840.1-201ENST00000623069 542 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AL359757.1-201ENST00000623176 255 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC090617.9-201ENST00000623751 147 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC021106.3-201ENST00000623925 531 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC011815.3-201ENST00000624194 473 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 U3.53-201ENST00000628922 216 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SIX4Q9UIU6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX4Q9UIU6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SIX4Q9UIU6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SIX4Q9UIU6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AL359922.3-201ENST00000624779 1670 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 DHX40P1-201ENST00000588725 1412 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC021146.4-201ENST00000309229 279 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 MIR16-2-201ENST00000362117 81 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 RNU1-83P-201ENST00000363426 164 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 SNORD113.2-201ENST00000364166 89 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 MIR659-201ENST00000384963 97 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 RNU6-584P-201ENST00000410350 95 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AL606495.1-201ENST00000422100 813 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC114973.1-201ENST00000429057 632 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 MTATP6P17-201ENST00000431030 672 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 NMNAT1P2-201ENST00000435192 860 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 YWHAZP2-201ENST00000440317 728 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC004854.1-201ENST00000440356 349 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AL096829.2-201ENST00000446582 742 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC239798.3-201ENST00000454459 408 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 SCARNA10-201ENST00000459255 330 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 RNU5A-7P-201ENST00000515979 116 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC084759.1-201ENST00000561168 290 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AL049838.1-201ENST00000563647 981 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 MIR4330-201ENST00000579077 105 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms