Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 SNORA48.9-201ENST00000516419 162 ntBASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 AC104997.1-201ENST00000519761 717 ntBASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 AC015912.2-201ENST00000571053 181 ntBASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 HMGB1P51-201ENST00000605166 638 ntBASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 AC090948.1-201ENST00000607464 549 ntBASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 AL035461.2-201ENST00000619201 524 ntBASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 UGT2B26P-201ENST00000508672 1613 ntBASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
CLCF1Q9UBD9 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 FAM3C2-201ENST00000312214 681 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 UBBP2-201ENST00000376781 231 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC068538.1-201ENST00000376856 336 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 VDAC2P1-201ENST00000399358 958 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 RPL23AP59-201ENST00000399415 461 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 MIR1271-201ENST00000408537 86 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 MTCYBP7-201ENST00000419540 1134 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 RPL21P43-201ENST00000425440 472 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 TMX2P1-201ENST00000436507 708 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 TDGF1P1-201ENST00000445734 527 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 MORF4L1P4-201ENST00000450245 976 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC002553.2-201ENST00000453217 340 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 RPL10P17-201ENST00000453852 316 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 RPS6P2-201ENST00000454208 705 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 RPL23AP24-201ENST00000458203 385 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 RN7SL385P-201ENST00000468873 276 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 RNA5SP303-201ENST00000516192 130 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 OR8G5-201ENST00000524943 1041 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 OR4V1P-201ENST00000525394 1140 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC109635.6-201ENST00000525487 1113 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC130352.1-201ENST00000602979 661 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC015871.5-202ENST00000623252 701 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 LINC00622-201ENST00000562811 1570 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 CPHL1P-201ENST00000461341 3407 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 CASC19-204ENST00000641001 2055 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 AL606537.1-201ENST00000607258 2011 ntBASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLCF1Q9UBD9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 RNA5SP509-201ENST00000364577 119 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AL592291.1-201ENST00000403830 352 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC004690.1-201ENST00000418216 328 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AL358176.3-201ENST00000420757 454 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 RPS12P10-201ENST00000427031 377 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 MTCO1P57-201ENST00000432182 261 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 ELOCP3-201ENST00000439303 348 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 HSPE1P22-201ENST00000456856 327 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AL591473.1-201ENST00000464297 313 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC011276.1-201ENST00000469688 323 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 LARP7P4-201ENST00000481075 878 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC093840.1-201ENST00000511599 336 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 RN7SKP46-201ENST00000515942 234 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms