Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 ELOCP3-201ENST00000439303 348 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL513321.1-201ENST00000441175 761 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC007000.2-201ENST00000442564 487 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 GXYLT1P1-201ENST00000446657 490 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL157884.3-201ENST00000448273 1184 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 SLC25A18P1-201ENST00000449385 454 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 CCRL1P1-201ENST00000449542 1053 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 RPL10P17-201ENST00000453852 316 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 SETP20-201ENST00000457046 852 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 RPS27AP2-201ENST00000457576 465 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC092902.1-201ENST00000486999 259 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC093763.2-201ENST00000505334 1223 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 PGBD4P4-201ENST00000509673 613 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 VTA1P2-201ENST00000520205 911 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 BUD31P1-201ENST00000521828 359 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 IGKV3D-34-201ENST00000522638 302 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC012146.2-201ENST00000576545 416 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC027243.2-201ENST00000602530 724 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC023762.1-201ENST00000603280 584 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 IMMP1LP3-201ENST00000604197 224 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 KATNBL1P5-201ENST00000605015 517 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC020634.1-201ENST00000608701 549 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL592494.3-201ENST00000609485 464 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC025016.1-201ENST00000616746 682 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL163051.2-201ENST00000618976 735 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.46□□□□□ -1.69
NDE1Q9NXR1 AL136520.1-201ENST00000600311 1322 ntBASIC4.46□□□□□ -1.69
NDE1Q9NXR1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NDE1Q9NXR1 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.46□□□□□ -1.69
NDE1Q9NXR1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.46□□□□□ -1.69
NDE1Q9NXR1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
NDE1Q9NXR1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
NDE1Q9NXR1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AL078604.1-201ENST00000404609 466 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 RN7SKP59-201ENST00000410520 314 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 RNA5SP39-201ENST00000411245 120 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 RN7SKP293-201ENST00000411389 296 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC062016.2-201ENST00000420950 676 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 ZNF965P-201ENST00000432501 817 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 HLA-N-201ENST00000437516 135 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 MTND2P6-201ENST00000455337 1030 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 MTND6P32-201ENST00000457611 483 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 APOOP2-201ENST00000461561 539 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 CABYRP1-201ENST00000465493 1045 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC074386.1-201ENST00000476560 767 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC093663.2-201ENST00000484625 313 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 RPL23AP73-201ENST00000492507 471 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 OR9N1P-202ENST00000494289 481 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC022826.1-201ENST00000519383 805 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 OR5M7P-201ENST00000526140 972 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 DUX4L52-201ENST00000549363 777 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 NOP56P3-201ENST00000549457 385 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 CYP4A43P-201ENST00000568156 121 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 RN7SL802P-201ENST00000577858 299 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC011447.4-201ENST00000587562 111 ntBASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.46□□□□□ -1.7
NDE1Q9NXR1 AC008521.2-201ENST00000591021 259 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms