Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AL583856.2-201ENST00000606298 543 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 AC108865.2-201ENST00000606881 432 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 AL157392.4-201ENST00000609756 345 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 RN7SL544P-201ENST00000617232 284 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 AL121895.2-201ENST00000619558 447 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 RN7SL763P-201ENST00000620922 284 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 AL078595.3-201ENST00000623815 1166 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 MFSD8-245ENST00000641743 948 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 XPOTP1-201ENST00000443317 2398 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHB16Q9NRJ7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL022393.1-201ENST00000625142 1677 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC114947.2-201ENST00000565748 2125 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC068870.1-201ENST00000563737 2455 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AP000568.1-201ENST00000282964 442 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC017079.1-201ENST00000333650 415 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 RNA5SP273-201ENST00000362484 113 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 RNA5SP500-201ENST00000364486 119 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 OR7E156P-201ENST00000400303 464 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 PPIAP9-201ENST00000403866 498 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL449283.1-202ENST00000418249 604 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 PAICSP7-201ENST00000419829 962 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 NANOGP5-201ENST00000424456 877 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 HMGB3P24-201ENST00000433260 622 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC004865.1-201ENST00000442276 1003 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL009048.1-201ENST00000450437 298 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL591473.1-201ENST00000464297 313 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 ARL4AP1-201ENST00000503220 705 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 RNA5SP438-201ENST00000516561 112 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AF279873.1-201ENST00000523393 313 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 OR8K4P-201ENST00000534608 872 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 SERPINE4P-201ENST00000554978 281 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC092121.1-201ENST00000569452 202 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC106052.1-201ENST00000608029 497 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AP000238.1-201ENST00000608759 426 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AP000255.1-201ENST00000610276 676 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC105227.2-201ENST00000615075 605 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC004232.3-201ENST00000622977 525 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AL157770.1-201ENST00000623049 439 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC015871.5-202ENST00000623252 701 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC135068.5-201ENST00000624197 983 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC087565.3-203ENST00000641018 837 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AC073869.8-201ENST00000641806 335 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 SCN1A-220ENST00000641603 12506 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 MAPK10-304ENST00000641341 3984 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 OR51H2P-202ENST00000641424 3046 ntBASIC4.7□□□□□ -1.66
PCDHB16Q9NRJ7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB16Q9NRJ7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB16Q9NRJ7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB16Q9NRJ7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PCDHB16Q9NRJ7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms