Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 OR14L1P-202ENST00000641545 3009 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 IGKV7-3-201ENST00000357453 298 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 MIR129-1-201ENST00000384972 72 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AC004690.1-201ENST00000418216 328 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AC073069.1-201ENST00000428657 441 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AL162388.1-201ENST00000450912 352 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AC117525.1-201ENST00000515228 503 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 MTCYBP19-201ENST00000517463 1124 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 VTA1P2-201ENST00000520205 911 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 RN7SL802P-201ENST00000577858 299 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 RNF138P2-201ENST00000603490 592 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AL121932.1-201ENST00000605542 214 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AL353600.1-201ENST00000608148 251 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AC006338.2-201ENST00000616864 791 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AL023881.1-201ENST00000621088 301 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AL592437.2-201ENST00000421655 2434 ntBASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 AL137100.1-201ENST00000556703 1620 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 A2MP1-204ENST00000566278 4130 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AL442639.1-201ENST00000625030 1899 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 FAM3C2-201ENST00000312214 681 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 MIR92A2-201ENST00000385299 75 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 HSPD1P16-201ENST00000402302 394 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AL049693.1-201ENST00000402760 611 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 ATG4AP1-201ENST00000416893 538 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 TMBIM7P-201ENST00000418074 855 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 EIF4A1P1-201ENST00000420241 934 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 NPM1P26-201ENST00000426339 738 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC073143.1-201ENST00000436316 395 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 MTND2P28-201ENST00000457540 1044 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC103987.1-201ENST00000473394 348 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC013356.1-201ENST00000489027 564 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC091868.1-201ENST00000508746 304 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 RNU6-347P-201ENST00000516658 105 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 TOMM20P2-201ENST00000540082 421 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC084757.1-201ENST00000559987 490 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC116553.2-201ENST00000564203 463 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 MIR5699-201ENST00000578903 90 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 RPL12P25-202ENST00000598100 674 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AL356218.2-201ENST00000605264 187 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC009318.3-201ENST00000616916 503 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 LINC00901.1-201ENST00000617252 152 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 AC007382.1-201ENST00000624376 2618 ntBASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF3Q9HD45 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RNU4-39P-201ENST00000362455 127 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RNU6-984P-201ENST00000363236 109 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RNA5SP397-201ENST00000391323 118 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC240504.1-201ENST00000395709 845 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 SNORA11-201ENST00000408789 128 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 ELOCP19-201ENST00000411919 318 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LINC00993-201ENST00000420453 540 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms