Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC010132.2-201ENST00000295493 1043 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 RPL10P10-201ENST00000403509 664 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC098592.2-201ENST00000413158 265 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC104333.2-201ENST00000422630 192 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 MTCO1P51-201ENST00000427672 1060 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 MTND2P5-201ENST00000432656 1006 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC096638.2-201ENST00000434965 711 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 THAP5P1-201ENST00000439089 262 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ATP5C1P1-201ENST00000441945 895 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 GTF3AP5-201ENST00000442645 697 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC011753.3-201ENST00000443436 406 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC092685.1-201ENST00000447960 1243 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 EXOSC3P1-201ENST00000448649 500 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 VN1R40P-201ENST00000455196 941 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 NIFKP7-201ENST00000503365 834 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 RNU6-319P-201ENST00000516025 108 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC007834.2-201ENST00000536310 343 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 MIR3667-201ENST00000581025 74 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 RPP40P2-201ENST00000603596 712 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC008745.1-201ENST00000604064 271 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 MIR1264-201ENST00000616374 69 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 MIR7703-201ENST00000620784 77 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AP000346.3-201ENST00000622821 210 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AL121594.5-201ENST00000631724 573 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 MFSD8-220ENST00000641243 1422 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AL031595.2-201ENST00000624215 19071 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 RNA5SP191-201ENST00000362585 102 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 RNU5E-10P-201ENST00000363506 118 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 RNU6-398P-201ENST00000384143 109 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AL021331.1-201ENST00000402817 582 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 VN1R31P-201ENST00000417498 730 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AL606490.7-201ENST00000433136 191 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AL138878.2-201ENST00000440581 1241 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 NDUFA12P1-201ENST00000455914 406 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 SNORD11.1-201ENST00000459482 85 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 STRADBP1-201ENST00000478954 1281 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 RPL5P22-201ENST00000480199 884 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 GAPDHP56-201ENST00000506031 988 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms