Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC006946.1-201ENST00000429106 328 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 DYNLL1P7-201ENST00000429273 258 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 TXNP2-201ENST00000443918 295 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AL354714.3-201ENST00000447284 493 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AL451050.1-201ENST00000450126 415 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 CYCSP28-201ENST00000534284 321 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC069240.1-201ENST00000548774 375 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC090312.1-201ENST00000580637 348 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 OR1AB1P-201ENST00000585564 761 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC068790.7-201ENST00000602347 528 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AL512782.1-201ENST00000603093 364 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC025946.2-201ENST00000603398 234 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC067959.1-201ENST00000604334 379 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC020634.1-201ENST00000608701 549 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC087821.1-201ENST00000623639 567 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM4Q9C037 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC008549.2-201ENST00000333482 706 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 SNORA73.1-201ENST00000363107 205 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 SNORA66-201ENST00000384792 133 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 AL603766.1-201ENST00000407763 664 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 GSTM3P2-201ENST00000412746 530 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 ARL2BPP10-201ENST00000446487 531 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 OR1H1P-201ENST00000448731 937 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AURKAPS2-201ENST00000454983 333 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC106785.1-201ENST00000565935 262 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 VN1R85P-201ENST00000601587 426 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC074276.2-201ENST00000619891 348 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC021106.3-201ENST00000623925 531 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 SMG1P6-201ENST00000532337 2930 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 AC093311.1-201ENST00000506586 2021 ntBASIC4.66□□□□□ -1.66
TRIM4Q9C037 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM4Q9C037 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM4Q9C037 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRIM4Q9C037 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM4Q9C037 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM4Q9C037 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
TRIM4Q9C037 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
TRIM4Q9C037 AC010928.1-201ENST00000592477 1447 ntBASIC4.65□□□□□ -1.66
TRIM4Q9C037 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
TRIM4Q9C037 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM4Q9C037 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 RNU4-39P-201ENST00000362455 127 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AL357515.1-201ENST00000402967 542 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 RN7SKP106-201ENST00000410832 272 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC009237.5-201ENST00000414271 501 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 RPL12P43-201ENST00000420608 499 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 NANOGP6-201ENST00000429190 847 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 EIF2S2P2-201ENST00000447161 982 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC000111.2-201ENST00000448200 210 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AL356390.1-201ENST00000455684 397 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 MTND2P28-201ENST00000457540 1044 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 RN7SL319P-201ENST00000480656 221 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC138701.1-201ENST00000524329 714 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 MED28P5-201ENST00000528254 438 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC133555.2-201ENST00000550213 292 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC024941.1-201ENST00000612250 334 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms