Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 DDX18P5-201ENST00000534547 1306 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RNU6-560P-201ENST00000364007 108 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RN7SKP292-201ENST00000365522 317 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 PPIAP9-201ENST00000403866 498 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 OR6E1P-201ENST00000414424 923 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC006960.1-201ENST00000419980 153 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC007435.1-201ENST00000421086 415 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 DPRXP1-201ENST00000426312 460 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 FMO7P-201ENST00000436045 768 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RPL12P18-201ENST00000437175 325 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC064862.4-201ENST00000442180 334 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 KATNBL1P3-201ENST00000443475 909 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RPL36AP39-201ENST00000445859 318 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC079776.3-201ENST00000450665 370 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC026348.1-201ENST00000462549 1053 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RPL23AP71-201ENST00000470966 469 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 BET1P1-201ENST00000482276 359 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 OR5H4P-201ENST00000510851 923 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC109464.1-201ENST00000511091 819 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC098976.1-201ENST00000513014 541 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 MTCO1P47-201ENST00000523889 1271 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 GCSHP4-201ENST00000538792 439 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 MTCYBP27-201ENST00000555160 670 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 MIR4310-201ENST00000582950 57 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC011453.2-201ENST00000603737 729 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC069304.3-201ENST00000603938 1084 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC069545.1-201ENST00000605671 358 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AL139407.1-201ENST00000613826 1175 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC018926.3-201ENST00000618841 406 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 AC132068.1-201ENST00000623805 459 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 CU639417.4-201ENST00000623928 207 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 MIR3974-201ENST00000637126 96 ntBASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 ECM1P2-201ENST00000503354 1577 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC025263.3-201ENST00000622965 1396 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 SNORA51.12-201ENST00000384448 134 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 RNA5SP241-201ENST00000391326 114 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 RAP1BP1-201ENST00000412709 553 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 RPL7P53-201ENST00000421245 739 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 USP9YP22-201ENST00000438971 294 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 RN7SL72P-201ENST00000460697 269 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC117522.2-201ENST00000510049 657 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC010285.3-201ENST00000511668 676 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 RPL7L1P4-201ENST00000513004 707 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms