Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AC022022.1-201ENST00000430304 178 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 CDY14P-201ENST00000431260 1014 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 HLA-N-201ENST00000437516 135 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 PPIAP17-201ENST00000438507 471 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 CDY12P-201ENST00000440679 1015 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 CEACAMP7-201ENST00000444105 496 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 CDY13P-201ENST00000445813 1015 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 NDUFS5P3-201ENST00000450668 321 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 CDY23P-201ENST00000451661 1014 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 IGLV2-34-201ENST00000490007 283 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AC015795.1-201ENST00000513669 327 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 RNA5SP34-201ENST00000516887 130 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 IFITM8P-201ENST00000522529 394 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 DEFB109D-201ENST00000529497 240 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AL110118.1-201ENST00000553543 400 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AC090181.2-201ENST00000602975 672 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 BPIFA4P-203ENST00000603168 689 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AP006248.2-201ENST00000623309 592 ntBASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CMSS1Q9BQ75 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 RNA5SP191-201ENST00000362585 102 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 RNA5SP307-201ENST00000362863 116 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 MIR3074-201ENST00000384885 81 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 RAD23BP1-201ENST00000421404 1227 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 RPS12P10-201ENST00000427031 377 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 ELOCP18-201ENST00000434209 337 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 SUMO2P1-206ENST00000445436 284 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 RPL23AP71-201ENST00000470966 469 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC008953.1-201ENST00000497334 318 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC006499.6-201ENST00000511169 607 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC007016.1-201ENST00000512110 244 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 RN7SKP276-201ENST00000516242 268 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 MIR2114-201ENST00000516645 80 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 SOX5P1-201ENST00000524155 1127 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC005000.1-201ENST00000536192 288 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC105129.1-201ENST00000560250 297 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 BGLT3-201ENST00000564523 994 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 MTND2P13-201ENST00000577438 1039 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC004948.1-201ENST00000609858 672 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC007546.2-201ENST00000623996 360 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC010329.2-201ENST00000595195 2737 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 AC090017.1-201ENST00000548612 1779 ntBASIC3.79□□□□□ -1.8
CMSS1Q9BQ75 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 AC010300.1-201ENST00000600671 5134 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 Z73965.1-201ENST00000623412 2297 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 LINC00622-201ENST00000562811 1570 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 RNU6-1331P-201ENST00000363658 106 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 RNU6-1279P-201ENST00000383917 103 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 SNORA11.5-201ENST00000408163 128 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 RNA5SP113-201ENST00000410486 84 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 BX510359.2-201ENST00000417920 305 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 AC093698.1-201ENST00000423843 571 ntBASIC3.78□□□□□ -1.8
CMSS1Q9BQ75 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms