Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 RPL38P3-201ENST00000484463 213 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 OR7E83P-201ENST00000511021 970 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 EIF3KP3-201ENST00000514461 639 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 RNU2-53P-201ENST00000516257 147 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 SERPINA15P-201ENST00000529287 266 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 THAP2-202ENST00000547843 672 ntTSL 2 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 FDPSP3-201ENST00000556903 1013 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 MIR5583-1-201ENST00000580941 59 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 AC060771.1-201ENST00000582031 164 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 AC092747.3-201ENST00000603769 301 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 U1.34-201ENST00000618578 162 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 Y_RNA.288-201ENST00000364854 92 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 Y_RNA.493-201ENST00000384422 102 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 RNU6-328P-201ENST00000390887 106 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 EIF4E2P1-201ENST00000393781 255 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AL353151.1-201ENST00000402406 604 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AL391417.1-201ENST00000404100 426 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AL080285.1-201ENST00000404225 984 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 RNU6-101P-201ENST00000410323 104 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 RN7SKP121-201ENST00000410842 305 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AL358942.1-201ENST00000418595 1178 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 NMD3P2-201ENST00000421815 761 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AL359265.2-201ENST00000434367 631 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 RPL7P28-201ENST00000437739 740 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USB1Q9BQ65 YAP1P2-201ENST00000455104 610 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 HMGB1P4-201ENST00000455362 567 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 WBP1LP1-201ENST00000460451 896 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 RNU6-1016P-201ENST00000516689 94 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 RNU6-699P-201ENST00000517081 110 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 SOD1P3-201ENST00000518682 454 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 DEFB109D-201ENST00000529497 240 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC244034.2-201ENST00000562504 509 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC142086.3-201ENST00000563896 802 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AP005119.1-201ENST00000580956 292 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC129492.5-201ENST00000603489 315 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC004805.2-201ENST00000605382 482 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 HSPE1P14-201ENST00000605812 302 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC103710.2-201ENST00000609912 942 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AL133351.5-201ENST00000612789 106 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 7SK.12-201ENST00000612820 244 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC141273.2-201ENST00000618989 130 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC005858.3-201ENST00000624756 589 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 SNX18P12-201ENST00000624821 759 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 AC027559.1-201ENST00000636288 271 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 PARP1P1-201ENST00000413631 3026 ntBASIC6.9□□□□□ -1.3
USB1Q9BQ65 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC6.9□□□□□ -1.3
USB1Q9BQ65 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
USB1Q9BQ65 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.9□□□□□ -1.31
USB1Q9BQ65 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USB1Q9BQ65 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
USB1Q9BQ65 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
USB1Q9BQ65 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms