Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP88Q99567 CDY13P-201ENST00000445813 1015 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AC005002.1-201ENST00000447458 540 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 CDY23P-201ENST00000451661 1014 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP88Q99567 SEPT7P3-201ENST00000455017 621 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 RNU7-140P-201ENST00000459546 60 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 RN7SL189P-201ENST00000468631 289 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP88Q99567 AC134050.1-201ENST00000495088 933 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP88Q99567 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.99□□□□□ -1.45
NUP88Q99567 AC092709.1-201ENST00000521355 1045 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 BRD9P1-201ENST00000529855 560 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AP002812.4-201ENST00000532139 286 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP88Q99567 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP88Q99567 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP88Q99567 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP88Q99567 AC016839.1-201ENST00000578162 867 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.99□□□□□ -1.45
NUP88Q99567 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP88Q99567 AP005432.2-201ENST00000608162 586 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AC055764.2-201ENST00000610089 670 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 uc_338.9-201ENST00000617424 182 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 U6.48-201ENST00000618523 106 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AC091905.4-201ENST00000623432 202 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP88Q99567 AL121594.5-201ENST00000631724 573 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 FRG1EP-201ENST00000634469 770 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 ZNF663P-202ENST00000641770 1131 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP88Q99567 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP88Q99567 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP88Q99567 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 DDX18P4-201ENST00000511690 1966 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NUP88Q99567 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
NUP88Q99567 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NUP88Q99567 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 AC111188.2-201ENST00000529697 1387 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 RN7SKP95-201ENST00000362860 303 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 RN7SKP199-201ENST00000410325 305 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP88Q99567 RPL7AP49-201ENST00000429522 581 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 CETN4P-201ENST00000432407 469 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 BX323845.1-201ENST00000432417 179 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AL591438.1-201ENST00000433508 581 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP88Q99567 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP88Q99567 CASP3P1-201ENST00000446037 609 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP88Q99567 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP88Q99567 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP88Q99567 METTL15P1-201ENST00000481421 1045 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AC012123.2-201ENST00000485809 248 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP88Q99567 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP88Q99567 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP88Q99567 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.98□□□□□ -1.45
NUP88Q99567 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP88Q99567 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP88Q99567 AP001542.2-201ENST00000593141 364 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AC105254.2-201ENST00000603636 436 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 LSM1P2-201ENST00000604911 322 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AC015726.3-201ENST00000624501 418 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 BX649567.1-201ENST00000642071 1134 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 Z95331.1-201ENST00000623075 23112 ntBASIC5.98□□□□□ -1.45
NUP88Q99567 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP88Q99567 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
NUP88Q99567 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP88Q99567 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP88Q99567 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP88Q99567 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
NUP88Q99567 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NUP88Q99567 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
NUP88Q99567 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP88Q99567 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.97□□□□□ -1.45
NUP88Q99567 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP88Q99567 HSPA8P17-201ENST00000427029 1382 ntBASIC5.97□□□□□ -1.45
NUP88Q99567 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP88Q99567 RNA5SP428-201ENST00000365129 132 ntBASIC5.97□□□□□ -1.45
NUP88Q99567 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
NUP88Q99567 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP88Q99567 U3.23-201ENST00000391132 200 ntBASIC5.97□□□□□ -1.45
NUP88Q99567 AL078599.1-201ENST00000402075 293 ntBASIC5.97□□□□□ -1.45
NUP88Q99567 RNU4-22P-201ENST00000411058 166 ntBASIC5.97□□□□□ -1.45
NUP88Q99567 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP88Q99567 DDX39BP1-205ENST00000422507 192 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms