Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 NACA3P-201ENST00000359690 648 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC005300.1-201ENST00000428401 373 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 RPL23AP81-201ENST00000455252 467 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC093166.2-201ENST00000455969 1017 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 OR9M1P-201ENST00000459641 921 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC037198.2-201ENST00000478845 733 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 SETP14-201ENST00000497538 873 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC010201.1-201ENST00000605051 540 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RNA5SP307-201ENST00000362863 116 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AF213884.1-201ENST00000488102 463 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RN7SKP57-201ENST00000517248 293 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 HIGD1AP18-201ENST00000520730 278 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AL022393.1-201ENST00000625142 1677 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AP001273.1-201ENST00000624493 3152 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 PCNPP4-201ENST00000414817 517 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AL158156.1-201ENST00000422509 473 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RPL5P23-201ENST00000496040 868 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AC126323.6-202ENST00000568092 3511 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RPL7P44-201ENST00000424827 742 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AC008155.2-201ENST00000464337 397 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RPL23AP37-201ENST00000479658 549 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AC110792.1-201ENST00000491826 472 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 RPL7P23-201ENST00000493874 747 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 NDUFA5P2-201ENST00000519723 344 ntBASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSMD1Q96PZ7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC083837.1-201ENST00000565297 2994 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 UBDP1-202ENST00000457888 382 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 RNU1-63P-201ENST00000383902 164 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms