Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 IGKV2-18-201ENST00000522607 343 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 MTND2P17-201ENST00000550281 688 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 OR6R2P-201ENST00000609216 300 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC009163.6-201ENST00000612367 342 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AL645927.2-201ENST00000618350 349 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.34□□□□□ -1.88
AP1S3Q96PC3 AC092079.1-201ENST00000558620 1985 ntBASIC3.34□□□□□ -1.88
AP1S3Q96PC3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.34□□□□□ -1.88
AP1S3Q96PC3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC114546.3-201ENST00000623582 1734 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 CUL4AP1-201ENST00000514750 1863 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 RNU1-15P-201ENST00000353977 144 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 RN7SKP162-201ENST00000363605 345 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 RNU1-63P-201ENST00000383902 164 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AL078604.1-201ENST00000404609 466 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 RN7SKP177-201ENST00000410567 355 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 RPL7P53-201ENST00000421245 739 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 OR6K4P-201ENST00000423179 955 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 HIGD1AP8-201ENST00000453927 274 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC090114.3-201ENST00000479267 829 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC079841.1-201ENST00000481228 950 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 IGLV2-34-201ENST00000490007 283 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC103792.1-201ENST00000603591 919 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC004241.3-201ENST00000611728 517 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC116447.1-201ENST00000613153 453 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 MTND4P10-201ENST00000446199 1363 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AC135352.1-201ENST00000506173 1418 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
AP1S3Q96PC3 AL391684.1-202ENST00000641293 1636 ntBASIC3.33□□□□□ -1.88
AP1S3Q96PC3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC025031.4-201ENST00000621248 3271 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 SNORA74A-201ENST00000364089 198 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RNU1-89P-201ENST00000384592 164 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RNA5SP239-201ENST00000410218 129 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RNU6-603P-201ENST00000411403 107 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC115285.1-201ENST00000424879 736 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AL365396.1-201ENST00000430854 671 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 BMS1P19-201ENST00000433925 393 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AL391987.1-201ENST00000441025 200 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RPL7P31-201ENST00000450192 724 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AURKAPS2-201ENST00000454983 333 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AP000926.1-201ENST00000479573 241 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 RN7SL30P-201ENST00000488416 306 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC072052.1-201ENST00000496556 306 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 HIGD1AP14-201ENST00000507617 282 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC013701.1-201ENST00000522657 465 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms