Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC007016.1-201ENST00000512110 244 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 CCNHP1-201ENST00000513311 678 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 RPS27AP18-201ENST00000515536 459 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 RNA5SP228-201ENST00000516232 133 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AP006289.1-201ENST00000538089 277 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC125257.1-201ENST00000560400 2930 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 ADAD1P2-201ENST00000588476 646 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC023762.1-201ENST00000603280 584 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 NF1P10-201ENST00000613227 742 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC091905.2-201ENST00000623143 306 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC021106.3-201ENST00000623925 531 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC012618.3-205ENST00000637896 1496 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC068254.2-201ENST00000623938 3577 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC079741.1-201ENST00000321498 212 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 RNA5SP151-201ENST00000365632 117 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 SDHCP2-201ENST00000398565 501 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 OR1F12-201ENST00000402365 945 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 OR51A6P-201ENST00000418680 1004 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 SKP1P3-201ENST00000429280 487 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 RPL23AP25-201ENST00000430973 463 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 MAPRE1P3-201ENST00000435438 796 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AL162591.2-201ENST00000449634 317 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 CEACAMP6-201ENST00000452007 574 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC007686.1-201ENST00000488511 463 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC008897.1-201ENST00000494006 347 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 PPM1AP1-201ENST00000502740 1135 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 MTCO3P42-201ENST00000509488 518 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 MTCO3P39-201ENST00000514812 518 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 RNA5SP154-201ENST00000516193 111 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 IGLV3-26-201ENST00000520756 302 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC103792.1-201ENST00000603591 919 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AL135786.2-201ENST00000608422 615 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC131238.1-201ENST00000617135 328 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 AC105105.5-201ENST00000622635 1294 ntBASIC4.24□□□□□ -1.73
COL21A1Q96P44 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.24□□□□□ -1.73
COL21A1Q96P44 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL21A1Q96P44 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 KARSP3-201ENST00000571212 1504 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 OR10J6P-201ENST00000289731 930 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 SNORD113.2-201ENST00000364166 89 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 RNA5SP22-201ENST00000365393 109 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 SNORA70F-201ENST00000384142 135 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AL606490.8-201ENST00000441624 319 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 RPS27AP15-201ENST00000447672 466 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 RN7SL354P-201ENST00000469282 294 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 RPS29P22-201ENST00000472363 168 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC090013.1-201ENST00000485147 480 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC025445.1-201ENST00000502728 300 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms