Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.01□□□□□ -1.45
USP47Q96K76 AC090948.2-201ENST00000607363 564 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 AC019278.1-201ENST00000623516 479 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 MIR3653-201ENST00000625572 110 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.01□□□□□ -1.45
USP47Q96K76 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.01□□□□□ -1.45
USP47Q96K76 AC093591.2-201ENST00000565254 3843 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP47Q96K76 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USP47Q96K76 LARP1BP1-201ENST00000506036 1359 ntBASIC6□□□□□ -1.45
USP47Q96K76 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP47Q96K76 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USP47Q96K76 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6□□□□□ -1.45
USP47Q96K76 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
USP47Q96K76 AC067945.1-201ENST00000342609 618 ntBASIC6□□□□□ -1.45
USP47Q96K76 DNAJA1P1-201ENST00000425106 1187 ntBASIC6□□□□□ -1.45
USP47Q96K76 OR4C10P-201ENST00000434991 931 ntBASIC6□□□□□ -1.45
USP47Q96K76 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6□□□□□ -1.45
USP47Q96K76 AC079804.1-201ENST00000461922 436 ntBASIC6□□□□□ -1.45
USP47Q96K76 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USP47Q96K76 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6□□□□□ -1.45
USP47Q96K76 RNA5SP73-201ENST00000516744 108 ntBASIC6□□□□□ -1.45
USP47Q96K76 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6□□□□□ -1.45
USP47Q96K76 OSBPL9P2-201ENST00000526582 1228 ntBASIC6□□□□□ -1.45
USP47Q96K76 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6□□□□□ -1.45
USP47Q96K76 AC025884.1-201ENST00000556034 378 ntBASIC6□□□□□ -1.45
USP47Q96K76 AL023881.1-201ENST00000621088 301 ntBASIC6□□□□□ -1.45
USP47Q96K76 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USP47Q96K76 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USP47Q96K76 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP47Q96K76 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
USP47Q96K76 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP47Q96K76 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.99□□□□□ -1.45
USP47Q96K76 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
USP47Q96K76 RNU1-13P-201ENST00000384499 162 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 SEPT7P2-202ENST00000398921 823 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 RPL36AP36-201ENST00000418616 301 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.99□□□□□ -1.45
USP47Q96K76 CEACAMP1-201ENST00000434624 1035 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.99□□□□□ -1.45
USP47Q96K76 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 AC105137.1-201ENST00000484355 562 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 AC021146.3-201ENST00000511911 260 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 IGLV3-26-201ENST00000520756 302 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.99□□□□□ -1.45
USP47Q96K76 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.99□□□□□ -1.45
USP47Q96K76 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.99□□□□□ -1.45
USP47Q96K76 GLRXP2-201ENST00000555594 321 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.99□□□□□ -1.45
USP47Q96K76 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.99□□□□□ -1.45
USP47Q96K76 XKRY2-202ENST00000623874 1581 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 XKRY-202ENST00000624960 1581 ntBASIC5.99□□□□□ -1.45
USP47Q96K76 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.99□□□□□ -1.45
USP47Q96K76 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
USP47Q96K76 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP47Q96K76 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USP47Q96K76 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP47Q96K76 AL031595.2-201ENST00000624215 19071 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USP47Q96K76 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USP47Q96K76 RPL6P29-201ENST00000414863 865 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.98□□□□□ -1.45
USP47Q96K76 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.98□□□□□ -1.45
USP47Q96K76 PRELID3BP10-201ENST00000431957 584 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 Z95327.1-201ENST00000446082 482 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 RPL23AP81-201ENST00000455252 467 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 AC034236.1-201ENST00000469891 373 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.98□□□□□ -1.45
USP47Q96K76 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.98□□□□□ -1.45
USP47Q96K76 AP003730.1-201ENST00000524605 285 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 AC105233.3-201ENST00000531125 744 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.98□□□□□ -1.45
USP47Q96K76 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.98□□□□□ -1.45
USP47Q96K76 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.98□□□□□ -1.45
USP47Q96K76 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.98□□□□□ -1.45
USP47Q96K76 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.98□□□□□ -1.45
USP47Q96K76 AC245389.1-201ENST00000605141 529 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 MIR7151-201ENST00000617477 60 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 RNA5SP196-201ENST00000625967 102 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.98□□□□□ -1.45
USP47Q96K76 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.98□□□□□ -1.45
USP47Q96K76 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP47Q96K76 NCOA4P2-201ENST00000340589 1813 ntBASIC5.98□□□□□ -1.45
USP47Q96K76 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP47Q96K76 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP47Q96K76 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP47Q96K76 RPS27AP11-201ENST00000402798 447 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 RNA5SP317-201ENST00000410176 116 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 RNA5SP311-201ENST00000411290 116 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 RPS27AP13-201ENST00000498403 237 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms